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Table 2 The detailed antibiotic resistance profile and molecular characterization of 28 PVL-positive S. aureus isolates by haplotype, agr, SCCmec, MLST and PFGE typing

From: Clonal diversity and genomic characterization of Panton-valentine Leukocidin (PVL)-positive Staphylococcus aureus in Tehran, Iran

Haplotype group

agr type

SCCmec

ST

CC

PFGE

Antibiotic resistance

lukS-PV GenBank

lukF-PV GenBank

R

I

III

ST30

CC30

C

AK, E, CD, GM, CIP, RI, FOX

MT468511

MT468539

II

V

ST30

CC30

C

E, CD, CIP, RI, FOX

MT468512

MT468540

I

V

ST30

CC30

C

E, CIP, FOX

MT468514

MT468542

III

IV

ST30

CC30

NT

E, CIP, FOX

MT468515

MT468543

I

IV

ST22

CC22

C

FOX

MT468520

MT468548

III

IV

ST1136

CC1

C

E, FOX

MT468517

MT468545

III

IV

ST1136

CC1

C

E, FOX

MT468518

MT468546

I

IV

ST1996

Singleton

C

FOX

MT468510

MT468538

I

IV

ST121

Singleton

C

CIP, FOX

MT468519

MT468547

H1

I

–

ST5148

CC30

B

CD, LZD, RI

MT468494

MT468522

IV

III

ST5153

CC22

A

E, CD, GM, CIP, RI, FOX

MT468499

MT468527

I

–

ST5147

CC8

B

AK, E, CD, GM, CIP, SXT, RI

MT468493

MT468521

I

IV

ST5151

Singleton

NT

FOX

MT468497

MT468525

H2

III

V

ST30

CC30

NT

SXT, FOX

MT468513

MT468541

III

IV

ST30

CC30

B

E, FOX

MT468516

MT468544

III

III

ST5150

CC22

C

C, E, CIP, FOX

MT468496

MT468524

I

–

ST5155

CC22

B

E, CD

MT468501

MT468529

III

III

ST5157

CC22

A

AK, GM

MT468503

MT468531

I

III

ST5156

CC8

B

AK, E, CD, GM, CIP, RI, SXT, FOX

MT468502

MT468530

III

IV

ST5158

CC8

C

FOX

MT468504

MT468532

I

–

ST5149

CC1

B

E, CD, CIP, RI

MT468495

MT468523

II

–

ST5160

CC5

B

E, CD

MT468506

MT468534

III

–

ST5152

Singleton

B

E, CD

MT468498

MT468526

III

–

ST5154

Singleton

C

CIP, RI

MT468500

MT468528

I

IV

ST5159

Singleton

A

FOX

MT468505

MT468533

I

V

ST5161

Singleton

NT

FOX

MT468507

MT468535

I

–

ST5162

Singleton

B

E, CD, CIP, RI

MT468508

MT468536

II

–

ST1996

Singleton

A

NR

MT468509

MT468537

  1. - no SCCmec elements were detected (MSSA)
  2. NT non-typeable
  3. NR non-resistant