Epidemic characteristics of hemorrhagic fever with renal syndrome in China, 2006–2012
© Zhang et al.; licensee BioMed Central Ltd. 2014
Received: 25 February 2014
Accepted: 3 July 2014
Published: 11 July 2014
Hemorrhagic fever with renal syndrome (HFRS) caused by hantaviruses is a serious public health problem in China. The National Notifiable Disease Surveillance System (NNDSS) was established online by China CDC in 2004 and rodent surveillance sites were adjusted to 40 sites in 22 provinces in 2005. Here we analyzed the surveillance data of both human cases and rodents host during 2006–2012 to examine the epidemic trends of HFRS in recent years in China.
Records on HFRS human cases and surveillance data of rodents host from 2006 to 2012 were analyzed. Phylogenetic tree based on complete sequence of M segment of 58 virus isolates was constructed and analyzed to make a better understanding of the molecular diversity of hantaviruses in China.
During 2006–2012, a total of 77558 HFRS human cases and 866 deaths were reported with the average annual incidence rate of 0.83 cases/100,000 population and case fatality rate of 1.13%. 84.16% of the total cases were clustered in 9 provinces and mainly reported in spring and autumn-winter seasons. HFRS incidence in males was over 3 times higher than in females and farmers still accounted for the largest proportion. The average density of rodents was relatively stable from 2006 to 2012. Apodemus agrarius and Rattus norvegicus were predominant in wild field and residential area, respectively. Both hantaviruses carrying and infection rates in rodents had a rapid increase in 2012. Phylogenetic analysis showed that at least six clades of Hantaan virus and five of Seoul virus were prevalent in China.
HFRS in China was still a natural focal disease with relatively high morbidity and fatality and its distribution and epidemic trends had also changed. Surveillance measures, together with prevention and control strategies should be improved and strengthened to reduce HFRS infection in China.
KeywordsHemorrhagic fever with renal syndrome (HFRS) Hantaviruses Epidemics Phylogenetic analysis
Hemorrhagic fever with renal syndrome (HFRS), characterized by fever, hemorrhage, kidney damage and hypotension, is an important infectious disease caused by different species of hantaviruses including Hantaan virus (HTNV) , Seoul virus (SEOV) , Puumala virus (PUUV) [3, 4] and Dobrava/Belgrade virus (DOBV/BGDV) . It is reported that the number of HFRS human cases in China accounts for almost 90% of the total cases worldwide [6, 7]. Although some prevention and control measures have been performed, HFRS remains a serious public health problem in China with about 20,000-50,000 human cases annually in mainland China [8, 9]. From 1981 to 2005, more than 20,000 cases of HFRS occurred annually, with a peak of 115,807 cases and 2569 deaths recorded in 1986 (Additional file 1: Figure S1). Laboratory based national HFRS surveillance system and development of vaccines for hantaviruses (HV) had been initiated for HFRS control and prevention in 1980s in China . In 2004, the National Notifiable Disease Surveillance System (NNDSS) was established online by Chinese Center for Disease Control and Prevention (China CDC) and HFRS cases of the whole country were reported daily through this system.
As HFRS is a rodent-borne disease, rodent surveillance sites were designed to be partially adjusted periodically according to the epidemic situation of hantavirus infection. A total of 48 counties were selected in 30 provinces at beginning in 1984, adjusted to 41 sites in 30 provinces in 1995, and then adjusted to 40 sites in 22 provinces in 2005  (Additional file 2: Figure S2). The major epidemic areas were covered over the whole period of surveillance and epidemiology and geographic distribution of hantavirus infections in rodents host were collected each year.
Here we analyzed the surveillance data of both human cases and rodents host during 2006–2012 to examine the epidemic trends of HFRS in recent years in China. Furthermore, several hantaviruses have been isolated from various rodent species and patients throughout China during these seven years. Preliminary serological characterization of these isolates indicated that HFRS in China was mainly caused by HTNV, SEOV and PUUV. We genetically characterized Chinese strains, along with representative isolates from other countries to obtain basic information on the variability of hantaviruses in China.
Records on HFRS human cases from 2006 to 2012 were obtained from the NNDSS, an administrative database developed by China CDC. Since 2004, surveillance information, which included number of cases and deaths, demographic characteristics, geographic and temporal distributions have been collected and updated daily. All provinces of the country contributed surveillance data through direct network report. Criteria for reporting cases was referred to the ’Diagnostic criteria for epidemic hemorrhagic fever’ (GB15996—1995 and ws 278—2008) of China.
Surveillance data of rodents host were gained from 22 provinces which collected information including number of mousetraps placed, number of rodents captured, number of lung and blood specimen collected from selected counties, et al. Then laboratory tests were performed and results were reported to related department of China CDC.
Epidemics of HFRS human cases
Numbers of HFRS cases were counted for each year during 2006–2012. Incidence rates were calculated per 100,000 population by using population estimates based on census of China. Fatality rates were presented as the ratio of dead cases and total cases for each year.
As for geographic and temporal distributions, HFRS cases were sorted by location (province) and time. The average incidence rate of each province was calculated and geographic distribution map of HFRS incidence was drawn using Mapinfo Professional 9.5 Software. Annual incidence from 2006 to 2012 was calculated and plotted to observe annual fluctuations of HFRS in China. Provinces with high incidence were selected and HFRS cases for each month were also analyzed to observe seasonal fluctuations.
Analysis of demographic characteristics was performed for HFRS cases by gender, age group, occupation and region of patients’ residence. 14 age groups with 5-year interval were defined for this study while cases number and fatality rate were used as analysis indicators.
Surveillance of Rodents host
40 counties in 22 provinces were selected as rodent surveillance sites and over 200,000 mousetraps were placed each year in both spring and autumn-winter seasons. The density of rodents, which was expressed as the ratio of rodents captured and mousetraps placed, was calculated for each year from 2006 to 2012, by seasons, and by type of patients’ residence. Composition of rodent species was classified by surveillance sites and by type of patients’ residence. Geographic maps for species composition were performed using Mapinfo Professional 9.5 Software.
Serological and molecular detection were practiced in samples from rodents host. The lungs of rodents were sliced, then detected by indirect immunofluorescence assay (IFA) to determine HV carrying rates and viral RNA was extracted from lungs for RT-PCR analysis. Serum samples were used for IFA and enzyme-linked immunosorbent assay (ELISA) and HV infection rates were analyzed.
Complete genomic sequences of M segment from 58 hantavirus strains were downloaded from the National Center for Biotechnology Information (NCBI) website and phylogenetic tree was performed using Mega 5.02 software and analyzed with the Maximum Likehood (ML) method with complete deletion of gaps. Bootstrap testing (1000 replicates) was employed. Representative hantaviruses, including HTNV, SEOV, PUUV and DOBV isolates from China, South Korea, Russia, et al. [12–14] and Chinese strains isolated from 2006 to 2012 were included in the phylogenetic analysis.
All data were analyzed by using standardized Excel spreadsheet software (Microsoft, Redmond, WA, USA) and GraphPad Prism Software (ver. 5.0; GraphPad Software, Inc., San Diego, CA, USA). Geographic maps were performed using Mapinfo Software (ver. Professional 9.5; Mapinfo, USA).
According to the medical research regulation of National Health and Family Planning Commission, China, our work was reviewed and approved by the ethics committee of China CDC, which uses international guidelines to ensure confidentiality, anonymity, and informed consent.
Descriptive analysis of HFRS epidemics
Epidemics of HFRS in China and five provinces with highest incidence, 2006-2012
Fatality rate (%)
Five provinces with highest HFRS incidence
Geographic distribution of HFRS human cases
There were totally 25 provinces in China that had reported HFRS deaths from 2006 to 2012, with average annual fatality rate from 0.44%-8.80%, while Shanghai was an exception because it only had one HFRS case in 2012 but dead. The top 3 provinces with HFRS deaths were Heilongjiang (150 deaths), Shandong (122 deaths), Shaanxi (110 deaths) and provinces with highest fatality rate were Chongqing (8.80%), Yunnan (6.73%) and Gansu (5.24%).
Temporal distribution of HFRS human cases
Demographic characteristics of HFRS human cases
Surveillance of Rodents host
Our study analyzed the surveillance data of both HFRS human cases and rodents host from 2006–2012 to determine the epidemic trends of HFRS in recent years. Since the year 2004, incidence of HFRS in China has steadily declined year after year till 2009, of which the reported HFRS cases dropped to the lowest level of the past two decades. It is noteworthy that since 2010, HFRS cases have been increasing but still clustered in the Northeast and East China. The reasons for this trend-change are not clear and it may just natural fluctuations in the epidemic process of HFRS. But it still needs to define factors contributed to this, which may affect HFRS incidence and make the control measures more effective.
From 1961–2005, over 20,000 HFRS cases were reported per year while the numbers of cases reported during 2006–2012 were below those reported for previous years. This probably due to the National Expanded Programme on Immunization (EPI) with hantavirus vaccine which have been implemented in selected key endemic sites since the year 2008. Seven provinces that with high incidence rates, including Liaoning, Heilongjiang, Jilin, Shandong, Hebei, Shaanxi and Zhejiang, were firstly chosen as trial areas . And then five other provinces (Jiangxi, Jiangsu, Inner Mongolia, Sichuan and Hubei) had joined in EPI of HV vaccine till June 2010. Besides, public education, rodent control measures and social changing may also contribute to the case.
Compared with previous years, there were little changes in the number of provinces that with high HFRS incidence, but the ranking had varied a lot. From 2006 to 2009, Heilongjiang province ranked first as for incidence rate and since 2010, Shaanxi province had ranked first in turns of Heilongjiang. HFRS incidence showed an obviously decreasing trend in most provinces of China, such as Heilongjiang, Liaoning, Jilin, Hebei and other places, contributing to wide range of vaccination and rodent control . However, in province Shaanxi, Shandong and Jiangxi, HFRS epidemic presented a rebounded trend. This may due to changes of natural or human factors such as changes of rodents habitat caused by abnormal climate, variation of rodents density and HV carrying rate induced by host migration, susceptible population changes infected by non-immune people coming into epidemic areas, et al. .
HFRS epidemic during 2006 to 2012 had little changes in demographic characteristics (age, gender and occupation), but the proportion of human cases in age groups of 15 to 60 years had gradually declined from 87.8% in 2006 to 78.8% in 2012, while proportion of incidence in age groups of <15 and >60 years had steadily increased. The target population of EPI project is 15 to 60 years old people in key areas of selected provinces [15, 18], although covered the main population with high HFRS incidence, it ignored the protection of persons in other age groups, especially > 60 years. Reported HFRS patients in 60–70 age group, of which people with declined immunity, accounted for 9.8% of the total cases in 2006, and had risen to 13.0% in 2012. The proportion of deaths number in this age group is increased from 10% in 2006 to 20% in 2011, but declined to 14.4% in 2012. Thus it is important to consider vaccine immunization to people aged from 60 to 70, to reduce HFRS incidence and deaths in this population.
HFRS in China were mainly caused by two types of hantaviruses, that were HTNV transmitted by Apodemus agrarius and SEOV transmitted by Rattus norvegicus. However, because of the limitations of data sources, either records obtained from NNDSS or gained from rodents surveillance sites were insufficient to distinguish the number of HFRS human cases reported or rodents host were caused by Hantaan virus or by Seoul virus. The incidence curve of Apodemus-type HFRS had two peaks (June to July and November to October) while the peak in autumn-winter was much higher than in spring season. The epidemic peak of Rattus-type HFRS was mainly in spring (March to May) . Temporal trend of HFRS from 2006 to 2012 was similar that cases were mainly reported in spring and autumn-winter, but incidence peak of the latter season was higher than that of the former, indicating that HFRS infection in China was mainly caused by Apodemus. Analysis on seasonal epidemic in key provinces showed that in recent years the spring incidence peak of different types of epidemic areas presented a downward trend while autumn-winter peak gradually increased, also suggesting that the proportion of Apodemus-type infection in China had been increasing. The density of rodents and HV-carrying rates were important factors affecting HFRS incidence. Surveillance data in selected sites showed that from 2006 to 2012, both rodents density and HV-carrying rates had not changed a lot, indicating that the statuses of HFRS rodents host were relatively stable. However, in some surveillance sites of Heilongjiang, Liaoning and Jilin province, the two factors mentioned above were much higher and in 2012, the HV carrying rates and infection rates had a rapid increase.
To make a better understanding of the molecular diversity of hantaviruses isolated from 2006 to 2012 in China and of their evolutionary relationship with hantaviruses isolated previously or from other HFRS epidemic countries, complete M sequences of 58 isolates obtained from either patients or rodents were selected and analyzed. Phylogenetic tree revealed that at least six clades of HTNV and five of SEOV were prevalent in China during 2006–2012, showing a high degree of genetic diversity. HTN and SEO viruses are found in both humans and rodents in China [19, 20] while the genetic variability among HTNV was higher than that among SEOV.
HFRS were still a natural focal disease with relatively high morbidity and fatality in China. Distribution and epidemic trend of the disease had also changed. Surveillance measures, together with prevention and control strategies should be improved and strengthened to reduce HFRS infection in China.
This work was supported by the National Science and Technology Major Project of China (2013ZX10004-101).
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