Silva pattern of stromal invasion (for HPV A EAC only) | Tumour grading (Total score (TB + NS)) for SCC | Tumour TILS | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Pattern B | Pattern C | Cannot be determined | Total | p-value | Well-differentiated (G1) | Moderately differentiated (G2) | Poorly differentiated (G3) | Total | p-value | Low (0–10%) | Intermediate (10–50%) | High (50–90%) | Total | p-value | |
HPV 16 | 1 (25%) | 2 (9.5%) | 0 (0%) | 3 (11.5%) | 0.630 | 7 (22.6%) | 11 (18.3%) | 11 (11.5%) | 29 (15.5%) | 0.253 | 23 (14.6%) | 7 (16.3%) | 2 (16.7%) | 32 (15%) | 0.949 |
HPV31 | 0 (0%) | 1 (4.8%) | 0 (0%) | 1 (3.8%) | 0.884 | 1 (3.2%) | 3 (5%) | 2 (2.1%) | 6 (3.2%) | 0.603 | 4 (2.5%) | 3 (7%) | 0 (0%) | 7 (3.3%) | 0.282 |
HPV39 | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | – | 0 (0%) | 2 (3.3%) | 3 (3.1%) | 5 (2.7%) | 0.598 | 4 (2.5%) | 0 (0%) | 1 (8.3%) | 5 (2.3%) | 0.231 |
HPV51 | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | – | 1 (3.2%) | 2 (3.3%) | 1 (1%) | 4 (2.1%) | 0.567 | 3 (1.9%) | 0 (0%) | 1 (8.3%) | 4 (1.9%) | 0.171 |
HPV18 | 0 (0%) | 5 (23.8%) | 0 (0%) | 5 (19.2%) | 0.479 | 7 (22.6%) | 21 (35%) | 31 (32.3%) | 59 (31.6%) | 0.470 | 45 (28.5%) | 15 (34.9%) | 4 (33.3%) | 64 (30%) | 0.696 |
HPV35 | 0 (0%) | 7 (33.3%) | 1 (100%) | 8 (30.8%) | 0.129 | 7 (22.6%) | 21 (35%) | 31 (32.3%) | 59 (31.6%) | 0.470 | 49 (31%) | 14 (32.6%) | 4 (33.3%) | 67 (31.5%) | 0.971 |
HPV59 | 0 (0%) | 10 (47.6%) | 1 (100%) | 11 (42.3%) | 0.103 | 15 (48.4%) | 27 (45%) | 33 (34.4%) | 75 (40.1%) | 0.247 | 66 (41.8%) | 18 (41.9%) | 2 (16.7%) | 86 (40.4%) | 0.227 |
HPV68 | 1 (25%) | 4 (19%) | 0 (0%) | 5 (19.2%) | 0.850 | 2 (6.5%) | 3 (5%) | 10 (10.4%) | 15 (8%) | 0.451 | 17 (10.8%) | 3 (7%) | 0 (0%) | 20 (9.4%) | 0.389 |
HPV33 | 1 (25%) | 5 (23.8%) | 0 (0%) | 6 (23.1%) | 0.854 | 6 (19.4%) | 2 (3.3%) | 8 (8.3%) | 16 (8.6%) | 0.035 | 15 (9.5%) | 6 (14%) | 1 (8.3%) | 22 (10.3%) | 0.677 |
HPV45 | 0 (0%) | 5 (23.8%) | 0 (0%) | 5 (19.2%) | 0.479 | 3 (9.7%) | 4 (6.7%) | 10 (10.4%) | 17 (9.1%) | 0.725 | 15 (9.5%) | 5 (11.6%) | 2 (16.7%) | 22 (10.3%) | 0.698 |
HPV66 | 0 (0%) | 5 (23.8%) | 0 (0%) | 5 (19.2%) | 0.479 | 4 (12.9%) | 4 (6.7%) | 9 (9.4%) | 17 (9.1%) | 0.612 | 16 (10.1%) | 5 (11.6%) | 1 (8.3%) | 22 (10.3%) | 0.934 |
HPV52 | 0 (0%) | 1 (4.8%) | 0 (0%) | 1 (3.8%) | 0.884 | 1 (3.2%) | 4 (6.7%) | 10 (10.4%) | 15 (8%) | 0.394 | 10 (6.3%) | 4 (9.3%) | 2 (16.7%) | 16 (7.5%) | 0.375 |
HPV53 | 0 (0%) | 1 (4.8%) | 0 (0%) | 1 (3.8%) | 0.884 | 0 (0%) | 0 (0%) | 1 (1%) | 1 (0.5%) | 0.621 | 1 (0.6%) | 1 (2.3%) | 0 (0%) | 2 (0.9%) | 0.559 |
HPV56 | 0 (0%) | 2 (9.5%) | 0 (0%) | 2 (7.7%) | 0.773 | 2 (6.5%) | 2 (3.3%) | 2 (2.1%) | 6 (3.2%) | 0.486 | 7 (4.4%) | 1 (2.3%) | 0 (0%) | 8 (3.8%) | 0.634 |
HPV58 | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | – | 4 (12.9%) | 2 (3.3%) | 3 (3.1%) | 9 (4.8%) | 0.070 | 8 (5.1%) | 1 (2.3%) | 0 (0%) | 9 (4.2%) | 0.552 |