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Table 10 Models of vaccines refined by Galaxy Refine

From: Development of a novel multi‑epitope vaccine against the pathogenic human polyomavirus V6/7 using reverse vaccinology

Model

GDT-HA

RMSD

MolProbity

Clash score

Poor rotamers

Rama favored

Initial

1.0000

0.000

3.074

5.4

18.2

71.5

MODEL 1

0.9097

0.506

2.216

14.1

0.8

89.6

MODEL 2

0.9087

0.504

2.240

15.4

0.3

90.0

MODEL 3

0.9037

0.517

2.195

14.4

0.8

90.6

MODEL 4

0.9142

0.498

2.338

15.3

1.3

89.6

MODEL 5

0.9077

0.515

2.230

14.2

0.5

89.2

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BMC Infectious Diseases

ISSN: 1471-2334

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