Table 4 Number of SNPs in each ORF in each lineage
Clade | ORF1ab | ORF3a | ORF6 | ORF7a | ORF7b | ORF8 | ORF10 | S | E | M | N | NCRa |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
19A | 12 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 3 | 5 |
19B | 7 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 2 | 0 |
20A | 13 | 4 | 1 | 0 | 0 | 0 | 0 | 5 | 0 | 1 | 3 | 1 |
20B | 26 | 0 | 0 | 1 | 0 | 0 | 0 | 4 | 1 | 1 | 5 | 3 |
20C | 10 | 2 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 |
20D | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 4 | 1 |
20E | 5 | 1 | 0 | 0 | 1 | 0 | 1 | 3 | 0 | 1 | 1 | 1 |
20 H | 14 | 3 | 2 | 0 | 0 | 2 | 0 | 6 | 1 | 1 | 6 | 4 |
20I | 12 | 0 | 0 | 0 | 0 | 3 | 0 | 9 | 0 | 1 | 7 | 2 |
21A | 18 | 1 | 0 | 3 | 0 | 1 | 0 | 10 | 0 | 2 | 6 | 5 |
21I | 135 | 21 | 2 | 5 | 1 | 5 | 3 | 38 | 0 | 3 | 20 | 16 |
21 J | 25 | 2 | 0 | 5 | 3 | 3 | 0 | 15 | 1 | 3 | 8 | 5 |