Table 6 The distribution of TB genotypes among single and mixed strains
Sub-lineage | Single strain n (%) | Mixed strain n (%) | Total n (%) |
|---|---|---|---|
EAI6-BGD1 | 2 (0.97) | 0 (0.0) | 2 (0.97) |
EAI1-SOM | 2 (0.97) | 13 (6.31) | 15 (7.28) |
Manu1 | 2 (0.97) | 0 (0.0) | 2 (0.97) |
Manu2 | 1 (0.49) | 0 (0.0) | 1 (0.49) |
BEIJING | 15 (7.28) | 35 (16.99) | 50 (24.27) |
CAS1-Delhi | 0 (0.0) | 1 (0.49) | 1 (0.49) |
CAS1-Kili | 1 (0.49) | 2 (0.97) | 3 (1.46) |
X2 | 0 (0.0) | 1 (0.49) | 1 (0.49) |
X3 | 2 (0.97) | 12 (5.83) | 14 (6.80) |
LAM1 | 0 (0.0) | 1 (0.49) | 1 (0.49) |
LAM3 | 0 (0.0) | 7 (3.40) | 7 (3.40) |
LAM4 | 3 (1.46) | 7 (3.40) | 10 (4.85) |
LAM5 | 2 (0.97) | 0 (0.0) | 2 (0.97) |
LAM9 | 2 (0.97) | 1 (0.49) | 3 (1.46) |
LAM-RUS | 0 | 2 (0.97) | 2 (0.97) |
LAM11-ZWE | 1 (0.49) | 1 (0.49) | 2 (0.97) |
S | 28 (13.59) | 6 (2.91) | 34 (16.50) |
T1 | 11 (5.34) | 6 (2.91) | 17 (8.25) |
T2 | 1 (0.49) | 0 (0.0) | 1 (0.49) |
T-H37Rv | 1 (0.49) | 0 (0.0) | 1 (0.49) |
Orphan | 0 (0.0) | 37 (17.96) | 37 (17.96) |
TOTAL | 73 (35.44%) | 133 (64.56) | 206 (100) |