Table 6 Output from 1928 and INH where genotypic prediction of antibiotic susceptibility test showed VME (bold) or ME (underlined)
| Â | Disc diffusion Phenotypic AST | Bioinformatic workflows Genotypic predicted AST | |
|---|---|---|---|
Isolate | Antibiotic (R or S) | R or S Resistance markers identified by 1928 | R or S Genes conferring antimicrobial resistance identified by INH |
SA 907 | Ciprofloxacin (R) | R grlA (S80F + I45M)a grlB (E422D) | S No genes |
SA 1525 | Ciprofloxacin(R) | R grlA (S80F) | S No genes |
SA 1852 | Ciprofloxacin(R) | R grlA (S80F) | S No genes |
SA 1153 | Ciprofloxacin(R) | R grlA (S80F) gyrA (S84L) | S No gene |
SA 1046 | Ciprofloxacin(S) | R grlA (S80F + I45M) grlB (E422D) | S No genes |
SA 61 | Clindamycin(R) | S No resistance markers | S No genes |
SA 63 | Clindamycin(R) | S No resistance markers | S No genes |
SA 804 | Clindamycin(R) | S No resistance markers | S No genes |
SA 804 | Erythromycin(R) | S No resistance markers | S No genes |
SA 535 | Fusidic acid (R) | R fusC | S No genes |
SA 846 | Fusidic acid (R) | R fusC | S No genes |
SA 1162 | Fusidic acid (R) | R fusC | S No genes |
SA 1333 | Fusidic acid (R) | S No resistance markers | S No genes |
SA 1349 | Fusidic acid (R) | S No resistance markers | S No genes |
SA 1640 | Fusidic acid (R) | S No resistance markers | S No genes |
SA 1370 | Fusidic acid (R) | S No resistance markers | S No genes |
SA 1197 | Isoxazolyl penicillin (S) | R mecC | R mecA |