Table 2 Genome sequence of SARS-CoV2
From: Longitudinal alterations of the gut mycobiota and microbiota on COVID-19 severity
Patient ID | Sample type | Ct value | NextClade lineage | Spike amino acid changes |
|---|---|---|---|---|
Cov1 | Stool | 32.9 | 20B | D614G |
Cov2 | Stool | 34.3 | 20B | M153T, D614G |
Cov3 | Stool | 40.2 | 20B | D614G |
Cov6 | Stool | 35.4 | 20B | D614G |
Cov7 | Stool | 37.0 | 20B | D614G |
Cov9 | Stool | 36.0 | 20B | D614G |
Cov13 | Stool | 37.2 | 20B | R273M, D614G |
Cov17 | Stool | 35.7 | 20B | R273M, D614G |
Swab | 30.8 | 20B | D614G | |
Sputum | 25.7 | 20B | D614G | |
Cov27 | Swab | 23.6 | 20B | D614G |
Sputum | 29.9 | 20B | D614G | |
Cov32 | Stool | 30.8 | 20B | D614G, Q675H |
Swab | 16.3 | 20B | D614G, Q675H | |
Sputum | 26.7 | 20B | D614G, Q675H | |
Cov38 | Stool | 37.8 | 20B | D614G |
Swab | 18.0 | 20B | D614G | |
Sputum | 29.5 | 20B | D614G | |
Cov40 | Stool | 38.0 | 20B | D614G |
Swab | 22.3 | 20B | D614G | |
Sputum | 32.3 | 20B | D614G |