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Table 1 List of primers and thermal condition used for molecular identification of Campylobacter species

From: Occurrence and multidrug resistance of Campylobacter spp. at duck farms and associated environmental and anthropogenic risk factors in Bangladesh

Primer

Sequence (5′-3′)

Target

Amplicon size (bp)

PCR condition (30 cycle)

References

Denature

Annealing

Extension

16S9F

16S1540R

GAGTTTGATCCTGGCTC

AAGGAGGTGATCCAGCC

16S rRNA

1530

94 °C, 30 s

47 °C, 30 s

72 °C, 90 s

Samosornsuk et al. [21]

HIP400F

HIP1134R

GAAGAGGGTTTGGGTGGTG

AGCTAGCTTCGCATAATAACTTG

hipO gene

735

94 °C, 30 s

55 °C, 30 s

72 °C, 45 s

Linton et al. [22]

Cj-cdtCU1

Cj-CdtCR2

TTTAGCCTTTGCAACTCCTA

AAGGGGTAGCAGCTGTTAA

Cj-cdtC

524

94 °C, 30 s

53 °C, 30 s

72 °C, 30 s

Asakura et al. [23]

Cc-CdtCU1

Cc-CdtCR1

TAGGGATATGCACGCAAAG

GCTTAATACAGTTACGATAG

Cc-cdtC

313

CfspCU2

CfspCR1

AAGCATAAGTTTTGCAAACG

GTTTGGATTTTCAAATGTTCC

Cf-cdtC

397

  1. Cj: C. jejuni; Cc: C. coli; Cf: C. fetus