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Table 4 Experimental and computational 9mer peptide confusion matrix

From: Computational MHC-I epitope predictor identifies 95% of experimentally mapped HIV-1 clade A and D epitopes in a Ugandan cohort

  Experimental Positive Experimental Negative
Computational Positive
(≥1 epitope(s) contained in a single experimental peptide sequence)
True Positive (88)
(Hits in table 2)
False Positive (37)
Computational Negative False Negative (5) True Negative (627)
  1. The total number of peptides experimentally tested were 757 and these are broken down to show the fractions from both the experimental testing and NetMHCpan4.0 computational predictions