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Table 2 Primers used for phylogenetic of uropathogenic Escherichia coli [23]

From: Distribution of virulence genes and phylogenetics of uropathogenic Escherichia coli among urinary tract infection patients in Addis Ababa, Ethiopia

Primer NameGene TargetNucleotide SequencePCR Product (bp)
chuA.1bchuA5′-ATGGTACCGGACGAACCAAC-3′288
chuA.2 5′-TGCCGCCACTACCAAAGACA-3′
yjaA.1byjaA5′-CAAACGTGAAGTGTCAGGAG-3′211
yjaA.2b 5′-AATGCGTTCCTCAACCTGTG-3′
TspE4C2.1bTspE4.C25′-CACTATTCGTAAGGTCATCC-3′152
TspE4C2.2b 5′-AGTTTATCGCTGCGGGTCGC-3′
AceK.farpA5′-AACGCTATTCGCCAGCTTGC-3’400
ArpA1.r 5′-TCTCCCCATACCGTACGCTA-3’