Table 2 Sequence types (STs), allelic profiles, and ompA genotypes of C. trachomatis strains from Sapporo
ST | C. trachomatis MLST alleles | No. of samples (%) | ompA genotypes (number) | ||||||
|---|---|---|---|---|---|---|---|---|---|
glyA | mdhC | pdhA | yhbG | pykF | lysS | leuS | |||
19 | 3 | 3 | 3 | 6 | 6 | 4 | 3 | 10 (18.8) | D (3), G (2), H (1), J (1), K (2), NA (1) |
21 | 3 | 3 | 3 | 2 | 6 | 4 | 8 | 8 (15.9) | E (1), F (7) |
23 | 3 | 3 | 3 | 6 | 6 | 8 | 3 | 3 (5.7) | H (3) |
30 | 3 | 3 | 5 | 6 | 6 | 4 | 3 | 4 (7.5) | D (3), NA (1) |
34 | 6 | 3 | 3 | 2 | 7 | 4 | 3 | 4 (7.5) | F (3), I (1) |
39 | 6 | 4 | 3 | 2 | 7 | 4 | 3 | 12 (22.6) | E (9), F (2), NA (1) |
52 | 3 | 3 | 5 | 6 | 6 | 1 | 3 | 4 (7.5) | G (4) |
54 | 6 | 3 | 3 | 2 | 6 | 4 | 3 | 1 (1.9) | F (1) |
81 | 6 | 4 | 8 | 2 | 7 | 4 | 3 | 1 (1.9) | E (1) |
70 (novel ST) | 3 | 3 | 8 | 6 | 6 | 4 | 3 | 3 (5.7) | D (2), NA (1) |
85 (novel ST) | 3 | 3 | 3 | 2 | 7 | 4 | 8 | 1 (1.9) | F (1) |
86 (novel ST) | 7 | 3 | 3 | 6 | 6 | 1 | 6 | 1 (1.9) | NA (1) |
87 (novel ST) | 3 | 3 | 3 | 6 | 6 | 4 | 9 | 1 (1.9) | I (1) |