Table 1 Spike gene and reference primer pairs used in this study
From: Molecular epidemiology of SARS-CoV-2 clusters caused by asymptomatic cases in Anhui Province, China
Primer name | Primer sequence(5′ → 3′) | Primer location | Primer reference |
|---|---|---|---|
AFa | 5′-CGC GAA CAA ATA GAT GGT TA-3’ | 21,320–21,339 | MN908947.3 |
ARb | 5′-CTG CAG CAC CAG CTG TCC AA-3’ | 22,368–22,387 | MN908947.3 |
BF | 5′-AGG GAA TTT GTG TTT AAG A-3’ | 22,146–22,164 | MN908947.3 |
BR | 5′-AAC ACC TGT GCC TGT TAA A-3’ | 23,231–23,249 | MN908947.3 |
CF | 5′-CCG GTA GCA CAC CTT GTA A-3’ | 23,002–23,020 | MN908947.3 |
CR | 5′-AAT GAG GTC TCT AGC AGC A-3’ | 24,128–24,146 | MN908947.3 |
DF | 5′-CCA GAT CCA TCA AAA CCA A-3’ | 23,997–24,015 | MN908947.3 |
DR | 5′-CTG GTG ATG TAT GAT TCT T-3’ | 25,065–25,083 | MN908947.3 |
EF | 5′-CTG CTC CTG CCA TTT GTC A-3’ | 24,808–24,826 | MN908947.3 |
ER | 5′-TTG GAG AGT GCT AGT TGC C-3’ | 25,632–25,650 | MN908947.3 |