Table 1 Primers used for amplification and sequencing [15]

NS5B- amplification-FOR

5′-TATGATACYCGCTGYTTYGACTC-3’

NS5B-amplification-REV

5′-GTACCTRGTCATAGCCTCCGTGAA-3’

NS5B- sequencing-FOR

5′-CTCAACSGTCACTGAGAGWGACAT-3’

NS5B-sequencing-REV

5′-CACGAGCATSGTGCAGTCCYGGAGC-3’

5’UTR-sequencing-FOR

5′-GCAACAGGGAAYYTDCCUGGTTGCTC-3’

5’UTR-sequencing-REV

5’CTATCAGGCAGTACCACAAGG-3’

CORE-sequencing-FOR

5′-GTGCCCCGGGAGGTCTCGTAG-3’

CORE-sequencing-REV

5′-CCAAGGGTACCCGGGCTG-3’