Table 1 Reference sequences used in plotting the phylogeny tree of this study
Strains | Accession numbers | genotypes | Starains | Accession numbers | genotypes |
|---|---|---|---|---|---|
MI1128 | LC228408 | G9 | CNMC3 | KT920808 | P [8] |
BJ-Q322 | KF673479 | G9 | CK00095 | JX027933 | P [8] |
VU12-13-101 | KT919508 | G9 | UR14-26 | LC105523 | P [8] |
MRC-DPRU1102 | KJ753473 | G9 | X1302 | KJ794102 | P [8] |
Km15064 | KX033644 | G9 | H1301 | KJ794103 | P [8] |
Hon-JK17–6-14 | KU312101 | G9 | Z1557 | KF372006 | P [8] |
BJ-Q532 | KF673480 | G9 | WZ7 | KU243615 | P [8] |
99-SP1542VP7 | AB091753 | G9 | AC314 | KT025876 | P [8] |
99-TK2082VP7 | AB091755 | G9 | To14–18 | LC105271 | P [8] |
JP13-3 | AB176679 | G9 | SI-R13 | KJ432798 | P [8] |
LL51695 | KC242226 | G9 | D | EF672570 | P [8] |
WZ660 | KU243678 | G9 | ISO42 | DQ355958 | P [8] |
km15118 | KX778607 | G9 | Nov10-N709 | HQ537506 | P [8] |
MRC-DPRU5123 | KP752521 | G9 | LY238-9 | KU174038 | P [4] |
F45 | AB180970 | G9 | N14-29 | LC342710 | P [4] |
AU32 | AB045372 | G9 | RMRC-11-03-0614 | MF373697 | P [4] |
N12–55 | LC380583 | G1 | O1157 | JX156413 | P [4] |
N10–17 | LC348885 | G1 | 07–96 s-98 | KY489875 | P [4] |
CK20027 | KC443768 | G2 | WZ193 | KU243633 | P [4] |
km15028 | KX033592 | G2 | |||
VU12–13-27 | MF167970 | G2 | |||
E3239 | KF371889 | G3 | |||
E2432 | KF371856 | G3 | |||
1RIZE2016 | MF494811 | G3 |