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Table 4 Counts of genomes per species in validation set

From: BMScan: using whole genome similarity to rapidly and accurately identify bacterial meningitis causing species

Species Counts
NCBI PubMLST Total
Neisseria meningitidis 792 0 792
Neisseria gonorrhoeae 393 0 393
Neisseria lactamica 7 135 142
Neisseria subflava 0 24 24
Neisseria mucosa 3 8 11
Neisseria polysaccharea 1 17 18
Neisseria cinerea 0 8 8
Neisseria elongata 4 1 5
Neisseria weaveri 0 1 1
Haemophilus influenzae 93 0 93
Haemophilus parainfluenzae 13 0 13
Haemophilus haemolyticus 5 0 5
Haemophilus parahaemolyticus 1 0 1
Streptococcus pneumoniae 7426 0 7426
Streptococcus mitis 58 0 58
Escherichia coli 5155 0 5155
Escherichia albertii 32 0 32
Escherichia fergusonii 7 0 7
Listeria monocytogenes 1313 0 1313
Listeria innocua 6 0 6
Total 15,309 194 15,503