Table 4 Counts of genomes per species in validation set
Species | Counts | ||
|---|---|---|---|
NCBI | PubMLST | Total | |
Neisseria meningitidis | 792 | 0 | 792 |
Neisseria gonorrhoeae | 393 | 0 | 393 |
Neisseria lactamica | 7 | 135 | 142 |
Neisseria subflava | 0 | 24 | 24 |
Neisseria mucosa | 3 | 8 | 11 |
Neisseria polysaccharea | 1 | 17 | 18 |
Neisseria cinerea | 0 | 8 | 8 |
Neisseria elongata | 4 | 1 | 5 |
Neisseria weaveri | 0 | 1 | 1 |
Haemophilus influenzae | 93 | 0 | 93 |
Haemophilus parainfluenzae | 13 | 0 | 13 |
Haemophilus haemolyticus | 5 | 0 | 5 |
Haemophilus parahaemolyticus | 1 | 0 | 1 |
Streptococcus pneumoniae | 7426 | 0 | 7426 |
Streptococcus mitis | 58 | 0 | 58 |
Escherichia coli | 5155 | 0 | 5155 |
Escherichia albertii | 32 | 0 | 32 |
Escherichia fergusonii | 7 | 0 | 7 |
Listeria monocytogenes | 1313 | 0 | 1313 |
Listeria innocua | 6 | 0 | 6 |
Total | 15,309 | 194 | 15,503 |