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Table 1 The list of primers used for genotyping NoV and SaV

From: Outbreak of caliciviruses in the Singapore military, 2015

   Type Primer Sequence (5′ to 3′) nt position
1 Norovirus GI Single PCR G1SKF CTGCCCGAATTYGTAAATGA 5342a
G1SKR CCAACCCARCCATTRTACA 5671 a
2 Norovirus GII Single PCR G2SKF CNTGGGAGGGCGATCGCAA 5058 b
G2SKR CCRCCNGCATRHCCRTTRTACAT 5401 b
3 Sapovirus 1st round PCR SV-F13 GAYYWGGCYCTCGCYACCTAC 5074 c
SV-R13 GGTGANAYNCCATTKTCCAT 5876 c
2nd round PCR SV-F22 SMWAWTAGTGTTTGARATG 5154 c
SV-R2 GWGGGRTCAACMCCWGGTGG 5591 c
  1. aNucleotide position of Norwalk virus (GenBank M87661)
  2. bNucleotide position of Lordsdale virus (GenBank X86557)
  3. cNucleotide position of Manchester virus (GenBank X86560)
  4. H = A or C or T; K = G or T; M = A or C; N = A or C or G or T; R = A or G; S = C or G; W = A or T; Y = C or T