Understanding pneumococcal serotype 1 biology through population genomic analysis

BMC Infectious Diseases

Table 1 Summary of the identified recombination events in the ST217 isolates in each SC

Clade	N_REC^a	Recombination Size (bp)			Recombination to Mutation (r/m)			SNPs per Recombination Event
		Lower 95 % CI	Mean	Upper 95 % CI	Lower 95 % CI	Mean	Upper 95 % CI	Lower 95 % CI	Mean	Upper 95 % CI
SC1-SA	92	1736	4650	7565	0	0.05	0.12	0	24.80	57.67
SC2-WA	86	50111	75156	100201	0	4.22	7.80	102.20	348	593.90
SC3-SEA	61	12	21149	9490	0	1.51	2.72	48.00	176.40	304.70

CI designates confidence intervals
^aThe number of recombination events identified in each clade in designated by N_REC

ISSN: 1471-2334