Genotyping assay performance | Time | Designated composite prevalence (SD) | LA-only | HC2-only | Sequential test | |||
---|---|---|---|---|---|---|---|---|
Composite prevalence estimate (SD) | Estimate-to-true ratio | Composite prevalence estimate (SD) | Estimate-to-true ratio | Composite prevalence estimate (SD) | Estimate-to-true ratio | |||
United States | ||||||||
Sen = 1.00 Spe = 1.00 | Baseline | 0.287 (0.007) | 0.287 (0.007) | 1.000 | 0.180 (0.006) | 0.628 | 0.129 (0.005) | 0.446 |
Reduced | 0.265 (0.007) | 0.265 (0.007) | 1.000 | 0.172 (0.006) | 0.657 | 0.124 (0.005) | 0.468 | |
% Reduction | 7.6 | 7.6 | 0.3 | 3.9 | ||||
Sen = 0.95 Spe = 0.95 | Baseline | 0.287 (0.007) | 0.612 (0.008) | 2.132 | 0.303 (0.007) | 1.056 | 0.275 (0.007) | 0.958 |
Reduced | 0.265 (0.007) | 0.602 (0.008) | 2.272 | 0.299 (0.007) | 1.128 | 0.271 (0.007) | 1.023 | |
% Reduction | 7.6 | 1.6 | 1.3 | 1.5 | ||||
Sen = 0.95 Spe = 0.90 | Baseline | 0.287 (0.007) | 0.792 (0.006) | 2.760 | 0.371 (0.008) | 1.293 | 0.356 (0.008) | 1.240 |
Reduced | 0.265 (0.007) | 0.787 (0.007) | 2.970 | 0.369 (0.008) | 1.392 | 0.354 (0.008) | 1.340 | |
% Reduction | 8.0 | 0.6 | 0.5 | 0.6 | ||||
Sen = 0.90 Spe = 0.90 | Baseline | 0.287 (0.007) | 0.788 (0.006) | 2.746 | 0.370 (0.007) | 1.289 | 0.355 (0.007) | 1.237 |
Reduced | 0.265 (0.007) | 0.783 (0.007) | 2.955 | 0.368 (0.007) | 1.389 | 0.352 (0.002) | 1.328 | |
% Reduction | 7.7 | 0.6 | 0.5 | 0.8 | ||||
Sen = 0.90 Spe = 0.85 | Baseline | 0.287 (0.007) | 0.887 (0.005) | 3.091 | 0.407 (0.008) | 1.418 | 0.399 (0.008) | 1.390 |
Reduced | 0.265 (0.007) | 0.885 (0.005) | 3.340 | 0.405 (0.008) | 1.528 | 0.397 (0.008) | 1.498 | |
% Reduction | 8.0 | 2.5 | 0.5 | 0.3 | ||||
Sen = 0.85 Spe = 0.85 | Baseline | 0.287 (0.007) | 0.885 (0.005) | 2.979 | 0.407 (0.007) | 1.418 | 0.399 (0.007) | 1.390 |
Reduced | 0.265 (0.007) | 0.883 (0.005) | 3.332 | 0.405 (0.007) | 1.528 | 0.397 (0.007) | 1.498 | |
% Reduction | 8.0 | 2.2 | 0.5 | 0.3 | ||||
Sen = 0.80 Spe = 0.80 | Baseline | 0.286 (0.007) | 0.939 (0.004) | 3.283 | 0.426 (0.008) | 1.489 | 0.422 (0.008) | 1.475 |
Reduced | 0.265 (0.007) | 0.938 (0.004) | 3.540 | 0.424 (0.008) | 1.600 | 0.421 (0.008) | 1.589 | |
% Reduction | 8.0 | 1.2 | 4.7 | 0.2 | ||||
Latin America | ||||||||
Sen = 1.00 Spe = 1.00 | Baseline | 0.104 (0.005) | 0.104 (0.005) | 1.000 | 0.110 (0.005) | 1.058 | 0.048 (0.003) | 0.461 |
Reduced | 0.084 (0.004) | 0.084 (0.004) | 1.000 | 0.103 (0.005) | 1.220 | 0.039 (0.003) | 0.464 | |
% Reduction | 19.2 | 19.2 | 6.3 | 18.7 | ||||
Sen = 0.95 Spe = 0.95 | Baseline | 0.104 (0.005) | 0.527 (0.008) | 5.067 | 0.270 (0.007) | 2.596 | 0.237 (0.007) | 2.279 |
Reduced | 0.084 (0.004) | 0.518 (0.008) | 6.167 | 0.267 (0.007) | 3.179 | 0.233 (0.006) | 2.774 | |
% Reduction | 19.2 | 1.7 | 1.1 | 1.7 | ||||
Sen = 0.95 Spe = 0.90 | Baseline | 0.104 (0.005) | 0.749 (0.007) | 7.202 | 0.355 (0.007) | 3.413 | 0.338 (0.007) | 3.250 |
Reduced | 0.084 (0.005) | 0.745 (0.007) | 8.869 | 0.353 (0.007) | 4.202 | 0.335 (0.007) | 3.988 | |
% Reduction | 19.2 | 0.5 | 0.6 | 0.8 | ||||
Sen = 0.90 Spe = 0.90 | Baseline | 0.104 (0.004) | 0.748 (0.007) | 7.192 | 0.354 (0.008) | 3.404 | 0.337 (0.008) | 3.240 |
Reduced | 0.084 (0.004) | 0.743 (0.007) | 8.845 | 0.353 (0.008) | 4.202 | 0.335 (0.008) | 3.988 | |
% Reduction | 19.2 | 0.7 | 0.3 | 0.6 | ||||
Sen = 0.90 Spe = 0.85 | Baseline | 0.104 (0.005) | 0.867 (0.006) | 8.337 | 0.400 (0.008) | 3.846 | 0.390 (0.008) | 3.750 |
Reduced | 0.084 (0.004) | 0.865 (0.005) | 10.298 | 0.399 (0.008) | 4.750 | 0.390 (0.008) | 4.643 | |
% Reduction | 19.2 | 0.3 | 0.2 | 0 | ||||
Sen = 0.85 Spe = 0.85 | Baseline | 0.104 (0.005) | 0.866 (0.005) | 8.327 | 0.399 (0.007) | 3.837 | 0.389 (0.007) | 3.740 |
Reduced | 0.084 (0.004) | 0.864 (0.005) | 10.286 | 0.398 (0.007) | 4.738 | 0.388 (0.007) | 4.619 | |
% Reduction | 19.2 | 0.2 | 0.2 | 0.2 | ||||
Sen = 0.80 Spe = 0.80 | Baseline | 0.104 (0.005) | 0.930 (0.004) | 8.942 | 0.424 (0.008) | 4.077 | 0.419 (0.008) | 4.029 |
Reduced | 0.084 (0.004) | 0.929 (0.004) | 11.060 | 0.423 (0.008) | 5.036 | 0.418 (0.008) | 4.976 | |
% Reduction | 19.2 | 0.1 | 0.2 | 0.2 |