Table 1 Study genotypes
PCRType | Cluster(s) | Jurisdictions* | Lineage†| Spoligotype | MIRU12 | Study cases | US cases‡ | States with genotype‡ |
|---|---|---|---|---|---|---|---|---|
PCR00002 | 05, 21, 32, 35, 38 | 5 (GA/MA3/MD) | L2 | 000000000003771 | 223325173533 | 44 | 1619 | 46 |
PCR00015 | 44 | 1 (GA) | L4 | 777776777760601 | 224325153323 | 15 | 749 | 43 |
PCR00016 | 16, 36 | 2 (GA/MA) | L4 | 700036777760731 | 222325143223 | 29 | 227 | 30 |
PCR00017 | 25, 43 | 2 (GA/TX) | L4 | 777776777760601 | 224325153324 | 7 | 139 | 28 |
PCR00022 | 22 | 1 (MA) | L4 | 777777777720771 | 225325153323 | 3 | 435 | 42 |
PCR00036 | 41 | 1 (TX) | L2 | 000000000003771 | 223425173563 | 8 | 165 | 22 |
PCR00041 | 28 | 1 (TX) | L1 | 677777477413771 | 254326223432 | 13 | 1392 | 46 |
PCR00044 | 17 | 1 (MD) | L3 | 703377400001771 | 227425113434 | 5 | 110 | 26 |
PCR00051 | 39 | 1 (TX) | L4 | 776037777760771 | 223125163324 | 29 | 164 | 28 |
PCR00079 | 03 | 1 (MD) | L4 | 777777777760771 | 223125153324 | 5 | 149 | 30 |
PCR00169 | 18 | 1 (MD) | L4 | 777776777760771 | 224325124324 | 4 | 41 | 17 |
PCR00224 | 11 | 1 (TX) | L2 | 000000000003771 | 223325163333 | 33 | 116 | 16 |
PCR00293 | 30 | 1 (GA) | L4 | 777777777760771 | 223225141324 | 16 | 30 | 3 |
PCR00497 | 26 | 1 (TX) | L4 | 776377777760771 | 233325153324 | 10 | 79 | 23 |
PCR00578 | 13 | 1 (GA) | L4 | 777776777760771 | 125325143224 | 13 | 43 | 7 |
PCR00719 | 10 | 1 (TX) | L4 | 777777777760771 | 223425143322 | 15 | 124 | 23 |
PCR00724 | 06 | 1 (MA) | L4 | 777777777760771 | 225125113322 | 3 | 89 | 24 |
PCR00849 | 23 | 1 (MA) | L4 | 777777347760471 | 224315143324 | 8 | 39 | 12 |
PCR01017 | 34 | 1 (MD) | L4 | 776177607760771 | 224326133324 | 4 | 42 | 17 |
PCR01034 | 37 | 1 (MA) | L4 | 777777777760731 | 223425123324 | 3 | 11 | 5 |
PCR01046 | 07 | 1 (MA) | L4 | 677777607760771 | 223226153321 | 4 | 58 | 19 |
PCR01047 | 01 | 1 (MD) | L4 | 777776777760601 | 223325153322 | 16 | 29 | 5 |
PCR01201 | 12 | 1 (TX) | L2 | 000000000003771 | 223325173534 | 32 | 164 | 25 |
PCR01571 | 31 | 1 (GA) | L2 | 000000000003771 | 223225173433 | 8 | 32 | 11 |
PCR01674 | 02 | 1 (MD) | L4 | 700076777760771 | 225225153326 | 6 | 12 | 3 |
PCR01872 | 15 | 1 (GA) | L4 | 777776777760601 | 223325153324 | 3 | 6 | 4 |
PCR01873 | 40 | 1 (TX) | L4 | 777776777760601 | 224325153321 | 3 | 28 | 10 |
PCR02143 | 04 | 1 (MD) | L4 | 777777777720771 | 225325153322 | 3 | 34 | 16 |
PCR02397 | 29 | 1 (GA) | L4 | 777776777760601 | 223325153323 | 11 | 50 | 10 |
PCR02651 | 19 | 1 (MD) | L4 | 777777743760771 | 223215153324 | 3 | 15 | 9 |
PCR03405 | 24 | 1 (MA) | L4 | 776377777760771 | 232325143324 | 9 | 11 | 2 |
PCR03412 | 08 | 1 (MA) | L2 | 000000000003771 | 222315173543 | 6 | 16 | 5 |
PCR03588 | 42 | 1 (GA) | L4 | 037776777760601 | 224325153423 | 6 | 17 | 3 |
PCR03994 | 20 | 1 (MD) | L4 | 777777600060771 | 224226123311 | 3 | 12 | 2 |
PCR04200 | 33 | 1 (MD) | L4 | 776177400000171 | 223326133323 | 4 | 10 | 3 |
PCR04837 | 27 | 1 (TX) | L4 | 777776777760601 | 224315163323 | 4 | 5 | 1 |
PCR04846 | 09 | 1 (TX) | L2 | 000000000003771 | 223425163333 | 7 | 17 | 1 |
PCR06732 | 14 | 1 (GA) | L4 | 777760377760771 | 223225153325 | 6 | 8 | 1 |