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Table 1 Genetic profile of eighty-eight VZV strains in eight provinces

From: Nationwide distribution of varicella-zoster virus clades in China

Province

Collection time

No. of V or Z

Clade

Residue at ORF 22 position

ORF38 (Pstl)

ORF54 (Bgll)

ORF62 (Small)

37902

38019

38055

38081

38177

Guangdong

2008–2010

V(21), Z(10)

2

G

G

C

C

A

+

+

-

Guangdong

2009

V (1)

4

A

A

C

C

A

+

+

-

Guangdong

2009

Z (1)

5

A

G

T

C

G

+

+

-

Sichuan

2009

V (9)

2

G

G

C

C

A

+

+

-

Beijing

2009

V (18)

2

G

G

C

C

A

+

+

-

Henan

2010

V (1)

2

G

G

C

C

A

+

+

-

Henan

2010

V (2a)

2

G

G

C

C

A

-

+

+

Shaanxi

2012

V (1a)

2

G

G

C

C

A

-

+

+

Shandong

2012

V(2)

2

G

G

C

C

A

+

+

-

Gansu

2012

V (7)

2

G

G

C

C

A

+

+

-

Jilin

2011–2012

V (15)

2

G

G

C

C

A

+

+

-

  1. 1. V varicella; Z herpes zoster
  2. 2. All genome positions are based on the published sequence for the VZV reference strain: Dumas (Clade 1; Accession # XO4370)
  3. 3. Numbers in parenthesis indicate the number of varicella and/or zoster strains
  4. 4. ain right corner indicates the VVAEs
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BMC Infectious Diseases

ISSN: 1471-2334

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