Table 4 Comparison of the obtained tMRCA values from Bayesian analysis to estimated times of infection according to incidence algorithms for patients with a known source of infection
Cluster affiliation | Incidence algorithm | Full analysis | Analysis based on cluster strains | |||||
|---|---|---|---|---|---|---|---|---|
Mean | Median | 95% HPD | Mean | Median | 95% HPD | |||
Pair 1 | Cluster 1 | 2009.0–2009.4 | 2008.5 | 2008.7 | 2007.5–2009.4 | 2008.8 | 2008.9 | 2008.0–2009.4 |
Pair 2 | Cluster 5 | 2005.3–2005.7 | 2004.2 | 2004.4 | 2002.8–2005.5 | |||
Trio | Cluster 3 | 2005.0–2005.5 | 2004.1 | 2004.3 | 2002.8–2005.2 | |||