Table 1 Typing results of C. albicans strains using RAPD, REA-PFGE and PCR MP methods.
From: PCR melting profile (PCR MP) - a new tool for differentiation of Candida albicansstrains
Name of strain | REA-PFGE Genotype | RAPD Genotype | PCR MP Genotype |
|---|---|---|---|
C. albicansreference strains and clinical unrelated strains from Department of Microbiology collection (DM) | |||
ATCC14053 | 1 | 1 | 1 |
ATCC10231 | 2 | 2 | 2 |
ATCC90029 | 3 | 3 | 3 |
ATCC64544 | 4 | 4 | 4 |
ATCC64545 | 3a | 3a | 3a |
ATCC64550 | 5 | 5 | 5 |
ATCC64547 | 6 | 6 | 6 |
DM1 | 7 | 7 | 7 |
DM2 | 8 | 8 | 8 |
DM3 | 7 | 7 | 7a |
DM4 | nt | 7 | 7b |
DM5 | 9 | 9 | 9 |
DM6 | 10 | 10 | 10 |
DM7 | 11 | 11 | 11 |
DM8 | 11a | 11 | 11a |
DM9 | 12 | 12 | 12 |
DM10 | 13 | 13 | 13 |
DM11 | 14 | 14 | 14 |
Candida albicans GDAŃSK | |||
G1/1 | 9 | 9 | 9 |
G1/2 | 9 | 9 | 9a |
G2 | 9 | 9 | 9b |
G3 | 9 | 9 | 9a |
G4 | 9a | 9 | 9a |
G5/1 | nt | 10 | 10 |
G5/2 | 10 | 10 | 10 |
G6 | 11 | 10a | 10a |
G7/1 | 11 | 9a | 11 |
G7/2 | 11 | 9a | 11 |
G8/1 | 11 | 9a | 11a |
G8/2 | 11 | 9a | 11 |
G9 | 11 | 9a | 11a |
G10 | 11 | 9a | 11a |
G11 | 11 | 9a | 11a |
G12 | 11a | 9a | 11b |
G13 | 9b | 9b | 12 |
G14 | 9a | 9b | 12 |
G15 | nt | 9 | 12a |
G16 | 12 | 11 | 13 |
G17 | 13 | 12 | 14 |
G18 | nt | 12 | 14a |
G19 | 14 | 13 | 15 |
G20 | 14 | 13 | 15a |
G21/1 | 14 | 13 | 15a |
G21/2 | 14 | 13 | 15a |
G22 | 14a | 14 | 15a |
G23/1 | 15 | 15 | 16 |
G23/2 | 15 | 15 | 16 |
G24/1 | 15 | 15a | 16a |
G24/2 | 15 | 15a | 16a |
G25 | 14 | 13 | 15a |
G26 | 14 | 13 | 15a |
G27 | 14 | 13 | 15a |
G28 | 14 | 13 | 15a |
G29 | 15 | 15a | 16 |
G30 | 15 | 15a | 16 |
G31/1 | 15 | 15a | 16 |
G31/2 | 15 | 12a | 16 |
G32 | 16 | 16 | 17 |
G33 | 15 | 15a | 16 |
G34 | 15 | 15a | 16 |
G35 | 15 | 15a | 16 |
G36/1 | 15 | 15a | 16a |
G36/2 | 15 | 15a | 16a |
G37 | 15 | 15a | 16a |
G38 | 17 | 17 | 18 |
G39 | 15 | 15a | 16a |
G40/1 | 17 | 17 | 18 |
G40/2 | 17 | 17 | 18 |
G41 | 17 | 17 | 18a |
G42 | 16 | 16 | 17 |
G43 | 16 | 16 | 17 |
G44 | 16 | 16 | 17 |
G45 | 17 | 17 | 18a |
G46 | 17 | 17 | 18a |
G47 | 18 | 18 | 19 |
G48/1 | 18 | 18 | 19 |
G48/2 | 18 | 18 | 19 |
G49 | nt | 18 | 19a |
G50 | 17 | 17 | 18a |
G51 | 17 | 17 | 18a |
G52 | 19 | 19 | 20 |
G53/1 | 19 | 19 | 20 |
G53/2 | 19 | 19 | 20 |
G54/1 | 19 | 19 | 20 |
G54/2 | 19 | 19 | 20 |
G55/1 | 17 | 17 | 18b |
G55/2 | 17 | 17 | 18b |
G56 | 17 | 17 | 18a |
G57 | 17 | 17 | 18a |
G58 | 17 | 17 | 18a |
G59 | 17 | 17 | 18a |
G60 | 20 | 19 | 21 |
G61 | 20a | 19 | 21a |
G62 | 20 | 19 | 21 |
G63 | 20 | 19 | 21b |
G64 | 19 | 19 | 20 |
G65 | 19 | 19 | 20 |
G66 | 19 | 19 | 20a |
G67 | 21 | 20 | 22 |
G68/1 | 17 | 17 | 18a |
G68/2 | 17 | 17 | 18a |
G69 | 20a | 19 | 21a |
G70/1 | nt | 20 | 22a |
G70/2 | 21 | 20 | 22 |
G71/1 | 17 | 17 | 18a |
G71/2 | 17 | 17 | 18a |
G72/1 | 21 | 20 | 22a |
G72/2 | 21 | 20 | 22a |
G73/1 | 19 | 19 | 20b |
G73/2 | 19 | 19 | 20b |
G74 | nt | 21 | 23 |
G75 | 22 | 21 | 23 |
G76 | 22 | 21 | 23 |
Candida albicans SZCZECIN | |||
S1/1 | 23 | 22 | 24 |
S1/2 | 24 | 23 | 25 |
S2 | 24 | 23 | 25 |
S3/1 | 24a | 23a | 25a |
S3/2 | 24a | 23a | 25a |
S4/1 (mother) | 25 | 24 | 26 |
S6/1 (child) | 25 | 24 | 26 |
S4/2 (mother) | 25 | 24 | 26 |
S5 (father) | 26 | 25 | 27 |
S6/2 (child) | 25 | 24 | 26 |