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Table 2 Bacterial species and strains used to test the specificity of the RiboSEQ real-time PCR test

From: Evaluation of a novel real-time PCR test based on the ssrAgene for the identification of group B streptococci in vaginal swabs

GBS Serotype Collection ref no Stool Panel Collection ref no
Streptococcus agalactiae Ia BCCM 15081 Escherichia coli DSM 30038
Streptococcus agalactiae Ib BCCM 15082 Morganella morganii DSM 30164
Streptococcus agalactiae Ic BCCM 15083 Proteus mirabilis DSM 4479
Streptococcus agalactiae II BCCM 15084 Klebsiella pneumoniae Clinical isolate
Streptococcus agalactiae III BCCM 15085 Escherichia hermannii DSM 4560
Streptococcus agalactiae IV BCCM 15086 Escherichia vulneris DSM 4564
Streptococcus agalactiae V BCCM 15087 Aeromonas hydrophila DSM 30015
Streptococcus agalactiae Ib BCCM 15090 Citrobacter freundii DSM 30039
Streptococcus agalactiae III BCCM 15094 Enterobacter cloacae ATCC 13047
Streptococcus agalactiae III BCCM 15095   
    Respiratory Panel  
Strep spp    Staphylococcus aureus DSM 11965
Streptococcus dysgalactiae   DSM 6176 Staphylococcus epidermidis ATCC 27626
Streptococcus oralis   DSM 20627 Pseudomonas aeruginosa ATCC 10145
Streptococcus pneumoniae   DSM 11865 Klebsiella oxytoca DSM 5175
Streptococcus parasanguinis   DSM 6778   
Streptococcus intermedius   DSM 20573 Neisseria Panel  
Streptococcus salivarius   DSM 20560 Neisseria meningitidis DSM 10036
Streptococcus uberis   DSM 20569 Neisseria lactamica DSM 4691
Streptococcus mitis   DSM 12643 Neisseria meningitidis ATCC 13077
Enterococcus faecalis   DSM 20371 Neisseria cinerea DSM 4630
Enterococcus faecium   DSM 20477   
Streptococcus gordonii   DSM 6777 Sepsis Panel  
Streptococcus mutans   DSM 20523 Streptococcus sanguis DSM 20567
Streptococcus pyogenes   DSM 20565 Streptococcus porcinus DSM 20725
Streptococcus anginosus   DSM 20563 Serratia marcescens DSM 1608
    Enterobacter aerogenes DSM 30053
Genital Panel    Staphylococcus haemolyticus DSM 20263
Acinetobacter lwoffii   DSM 2403 Streptococcus bovis DSM 20480
Lactobacillus acidophilus   DSM 20079   
Lactobacillus fermentum   DSM 20055   
Mobiluncus curtisii   DSM 2711   
Mobiluncus mulieris   DSM 2710