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Table 2 Primers used for amplification and sequencing of the gB gene

From: Stability of glycoprotein gene sequences of herpes simplex virus type 2 from primary to recurrent human infection, and diversity of the sequences among patients attending an STD clinic

Nucleotide position Type Sequence
5325453273 AS 5′-CCGTTAGCACATGTCTGCAT
53437–53456 S 5′-AGGTACTCTCCGCTCCACAA
53522–53541 AS 5′-TCTTTCTGGCCTTGTGTTCC
53710–53739 S 5′-CTACGTCCTGCAACTGCAAC
53801–53820 AS 5′-CGAAGGGGTTGGACATAAAG
54013–54032 S 5′-CTGCTGGACTACACGGAGGT
54108–54128 AS 5′-AGGTCGATGAAGGTGCTGAC
54299–54319 S 5′-GCTTTCGGTACGAAGACCAG
54371–54390 AS 5′-AGTTCTGCACGATCACGTTG
54510–54529 S 5′-ACCACGAGCTGACTCTCTGG
54730–54749 AS 5′-TACTCCCGCACGTACAGCTC
54943–54962 S 5′-ATCTCGACCACCTTCACCAC
55027–55046 AS 5′-CACTTGGTCATGGTGCAGAC
55232–55252 S 5′-TTGTGTACATGTCCCCGTTTT
55372–55391 AS 5′-TACTTGAGGTCGGTGGTGTG
55481–55500 S 5′-CAAGTACGTGCGGAACAACA
55643–55662 S 5′-CAAATTCAAGGCCACCATGT
55648–55667 AS 5′-GTGGCCTTGAATTTGTACGG
55914–55923 AS 5′-CTTTTTGGTTTTCCGCTTCC
55914–55923 S 5′-GGAAGCGGAAAACCAAAAAG
5617656195 S 5′-CCATCCTCTACTCGGTCCTG
  1. Nucleotide positions are given for the reference strain HG52, GenBank accession number Z 86099.2. Boldface indicates primers used for amplification, the rest were used for sequencing. S: sense. AS: antisense.