Comparison of the performance of carcinogenic HPV typing of the Roche Linear Array and Qiagen LiquiChip® HPV assays

Table 3 Interpretation of the 22 LA/LQ discordant cases using the in house RT-PCR assay

Sample ID	Roche LA HPV genotyping	Qiagen LQ	In house RT-PCR	In house RT-PCR in accordance with:
DISC1	35	Negative	35	Roche LA
DISC2	35.51.52	Negative	35.51	Roche LA
DISC3	39.54	Negative	39	Roche LA
DISC4	42	Negative	Negative	Qiagen LQ
DISC5	51	Negative	Negative	Qiagen LQ
DISC6	51.81	Negative	51	Roche LA
DISC7	53	Negative	Negative	Qiagen LQ
DISC8	53.59	Negative	Negative	Qiagen LQ
DISC9	54.42	Negative	Negative	Qiagen LQ
DISC10	54.84	Negative	Negative	Qiagen LQ
DISC11	59	Negative	59	Roche LA
DISC12	59	Negative	59	Roche LA
DISC13	59.61	Negative	59	Roche LA
DISC14	59.61.81	Negative	59	Roche LA
DISC15	6.84.42	Negative	Negative	Qiagen LQ
DISC16	61	Negative	Negative	Qiagen LQ
DISC17	67	Negative	Negative	Qiagen LQ
DISC18	67	Negative	Negative	Qiagen LQ
DISC19	67	Negative	Negative	Qiagen LQ
DISC20	68	Negative	Negative	Qiagen LQ
DISC21	81	Negative	56	Roche LA
DISC22	Negative	68	68	Qiagen LQ

ISSN: 1471-2334