|  | Nucleotide | Variant change |  | Genbank accession number | ||
---|---|---|---|---|---|---|---|
Chlamydia genotype | Frequency N (%) | Positiona | Nucleotide | Amino acid | Reference strain | Reference | This study |
D | 2 (3.6) | - | - | - | D-IC-CAL8 | DQ06428 | HM230054 |
E | 27 (49.0) | - | - | - | E-Bour | X52557 | HM230055 |
E variantb | 1 (1.8) | 372 | C > T | Silent (C) | E-Bour | X52557 | HM230056 |
F | 12 (21.8) | - | - | - | F-IC-Cal13 | X52080 | HM230057 |
G | 3 (5.5) | - | - | - | G-DK-K1 | AM90115 | HM230058 |
G variantc | 2 (3.6) | 487; 1003 | A > G; T > G | S > G; S > A | G-DK-K1 | AM90115 | HM230059 |
Ia | 1 (1.8) | - | - | - | Ia-IU-TC0167ut | FJ26194 | HM230061 |
J | 1 (1.8) | - | - | - | J-UW-36 | DQ06429 | HM230062 |
K | 3 (5.5) | - | - | - | K-UW-31 | DQ06429 | HM230063 |
N/Ad | 2 (3.6) | Â | Â | Â | Â | Â | Â |
Total | 55 | Â | Â | Â | Â | Â | Â |