From: Multiplex detection in tonsillar tissue of all known human polyomaviruses
Target sequence | HPyV type-specific probe (MFI) | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BKPyV | JCPyV | KIPyV | WUPyV | MCPyV | HPyV6 | HPyV7 | TSPyV | HPyV9 | HPyV10 | HPyV11 | HPyV12 | HPyV13 | |
BKPyV | 2105 | 43 | 35 | 36 | 33 | 54 | 42 | 27 | 34 | 34 | 44 | 35 | 19 |
JCPyV | 39 | 1145 | 32 | 32 | 32 | 34 | 34 | 24 | 39 | 28 | 47 | 32 | 20 |
KIPyV | 49 | 48 | 2522 | 45 | 42 | 43 | 43 | 38 | 48 | 44 | 59 | 47 | 17 |
WUPyV | 33 | 36 | 29 | 5704 | 31 | 31 | 65 | 18 | 35 | 26 | 43 | 29 | 19 |
MCPyV | 46 | 46 | 37 | 38 | 2736 | 45 | 41 | 31 | 40 | 37 | 49 | 39 | 21 |
HPyV6 | 38 | 38 | 34 | 32 | 33 | 3196 | 35 | 30 | 34 | 31 | 44 | 35 | 23 |
HPyV7 | 43 | 46 | 38 | 52 | 35 | 42 | 2574 | 29 | 41 | 41 | 51 | 37 | 18 |
TSPyV | 52 | 52 | 45 | 74 | 42 | 46 | 64 | 2894 | 47 | 42 | 58 | 47 | 19 |
HPyV9 | 50 | 48 | 44 | 40 | 47 | 47 | 39 | 29 | 1388 | 39 | 54 | 49 | 18 |
HPyV10 | 38 | 36 | 33 | 32 | 34 | 36 | 32 | 21 | 33 | 5116 | 47 | 31 | 24 |
HPyV11 | 47 | 56 | 42 | 51 | 45 | 66 | 61 | 57 | 59 | 58 | 1782 | 66 | 17 |
HPyV12 | 55 | 50 | 42 | 48 | 45 | 50 | 46 | 38 | 46 | 39 | 61 | 681 | 20 |
HPyV13 | 39 | 42 | 36 | 36 | 37 | 39 | 40 | 27 | 40 | 35 | 48 | 37 | 2327 |
Mix HPyVs | 745 | 1367 | 1518 | 2884 | 1511 | 1586 | 1125 | 733 | 603 | 2639 | 612 | 326 | 1631 |
cutoff | 85 | 81 | 77 | 81 | 77 | 83 | 77 | 75 | 81 | 72 | 107 | 73 | 127 |