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Figure 3 | BMC Infectious Diseases

Figure 3

From: Examining strain diversity and phylogeography in relation to an unusual epidemic pattern of respiratory syncytial virus (RSV) in a long-term refugee camp in Kenya

Figure 3

A Maximum Likelihood tree showing the relatedness of the unique 52 RSV A Dadaab sequences. Eight reference sequences within the previously identified RSV A genotypes (GA1-GA7 and SAA1) are included on the tree to allow determination of the genotypes of the Dadaab strain. Dadaab sequence taxon names are preceded by unfilled triangles. The tree was bootstrapped with 1000 iterations and only bootstrap support values ≥60 are shown. The clades identified within the GA2 genotype have been indicated on the tree as GA2 (2.1) and GA2 (2.2). The red branches identify those supported by a >60% bootstrap but did not meet the minimum genetic distance to be assigned into independent clades. Taxon names include country name/unique strain identifier/date of sampling.

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BMC Infectious Diseases

ISSN: 1471-2334

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