Bacteria | Designation | Oligonucleotide sequence | Gene | Reference |
---|---|---|---|---|
Streptococcus pneumoniae | F primer | AGCGATAGCTTTCTCCAAGTG | ply | [10] |
R primer | CTTAGCCAAATCGTTTACCG | |||
Probe | FAM*-ACCCCAGCAATTCAAGTGTTCGCG- BHQ1§ | |||
Moraxella catarrhalis | F primer | GTGAGTGCCGCTTTTACAA | copB | [11] |
R primer | CCGTGAGTGCCGCTTTTACAACC | |||
Probe | FAM –TGCTTTTGCAGCTGTTAGCCAGCCTAA- BHQ1 | |||
Haemophilus influenzae | F primer | GGTTAAATATGCCGATGGTGTTG | hpd3 | [12] |
R primer | TGCATCTTTACGCACGGTGTA | |||
Probe | ||||
Haemophilus influenza | F primer | CCAGCTGCTAAAGTATTAGTAGAAG | p6 | [13] |
R primer | TTCACCGTAAGATACTGTGCC | |||
Probe | FAM- CAGATGCAGTTGAAGGTTATTTAG–BHQ1 | |||
Staphylococcus aureus | Staphylococcus aureus | GTTGCTTAGTGTTAACTTTAGTTGTA | nuc | [14] |
Staphylococcus aureus | AATGTCGCAGGTTCTTTATGTAATTT | |||
Probe | FAM- AAGTCTAAGTAGCTCAGCAAATGCA–BHQ1 | |||
MRSA Ŧ | mec2-F | mec2-F | SCCmec | [9] |
mec3-F | ATTTCATATATGTAATTCCTCCACATCTC | |||
mec4-F | CAAATATTATCTCGTAATTTACCTTGTTC | |||
mec5-F | CTCTGCTTTATATTATAAAATTACGGCTG | |||
mec7-F | CACTTTTTATTCTTCAAAGATTTGAGC | |||
orfX-R | GGATCAAACGGCCTGCACA | |||
Probe | FAM-CRTAGTTACTRCGTTGTAAGACGTC-BHQ1 | |||
Bordetella pertussis | F primer | ATCAAGCACCGCTTTACCC | IS 481 | [15] |
R primer | TTGGGAGTTCTGGTAGGTGTG | |||
Probe | FAM- AATGGCAAGGCCGAACGCTTCA–BHQ1 |