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Table 4 K. pneumoniae isolates (n = 16) characterization including sequence type, wzi, plasmid and virulence profiles by WGS

From: Fluoroquinolone resistance among fecal extended spectrum βeta lactamases positive Enterobacterales isolates from children in Dar es Salaam, Tanzania

Isolate ID

ST

wzi allele

Virulence genes

Plasmids

β-lactam resistance genes

2129

607

133

iutA, tratT, terC, irp2

IncFII(K), IncFIB(K), IncR, IncFIB(Mar)

blaCTX-M-15, blaSHV-65, blaTEM-1B

1583

607

133

iutA, tratT

IncFII(K), IncFIB(K), IncFIA(HI1), IncR

blaCTX-M-15, blaSHV-65, blaTEM-1B

58

607

133

iutA, tratT

IncFII(K), InFIB(K), IncFIA(HI1), IncR

blaCTX-M-15, blaTEM-1B, blaSHV-65

2166

348

83

iutA, tratT, irp2

IncFII(K), IncFIB(K)

blaCTX-M-15, blaSHV-81, blaSHV-110,blaTEM-1B, blaOXA-1

2149

348

83

iutA, tratT, irp2

IncFIB(K)

blaCTX-M-15, blaSHV-81, blaSHV-110,blaTEM-1B, blaOXA-1

1912

14

2

iutA, tratT

IncFII(K), IncFIB(pKPHS1)

blaCTX-M-15, blaSHV-28, blaSHV-106, blaTEM-1B

1925

14

2

iutA, tratT

IncFII(K), IncFIB(pKPHS1)

blaCTX-M-15, blaSHV-28, blaSHV-106, blaTEM-1B

1722

3559

187

iutA, tratT

IncFIB(K)

blaCTX-M-15, blaTEM-1B, blaSHV-36, blaSHV-80, blaSHV-178, blaSHV-193, blaOXA-1

2111

985

39

iutA, tratT, irp2

IncFII(K)

blaCTX-M-15, blaOXA-1, blaSHV-187, blaTEM-1B

2142

479

23

iutA, terC

IncFIB(K), IncY, IncHI1B, Col440I

blaCTX-M-15,, blaSHV-62, blaTEM-1B

2155

429

187

iutA, tratT

IncFII(K)

blaCTX-M-15, blaSHV-36, blaSHV-80,blaSHV-178,blaSHV-193, blaTEM-1B, blaOXA-1

906

336

150

iutA, tratT, irp2

IncFII(K), IncFIB(K)

blaTEM-1B, blaSHV-94, blaSHV-96, blaSHV-172, blaOXA-1

2315

231

104

iutA, tratT, irp2

IncFII(K), IncFIB(K), IncR, Col440I, Col(MG828)

blaCTX-M-15, blaSHV-28, blaSHV-106, blaTEM-1B

2241

39

2

iutA, fyuA, terC

IncFII(K), IncFIB(K), IncFIB(Mar), IncHI1B, Col440I

blaCTX-M-15, blaSHV-40, blaSHV-56, blaSHV-79, blaSHV-85, blaSHV-89,blaTEM-1B, blaOXA-1

563

38

50

iutA, tratT, fyuA

IncFII(K), Col440I, Col440II, Col(MG828)

blaTEM-1B, blaSHV-40, blaSHV-56, blaSHV-79, blaSHV-85, blaSHV-89, blaOXA-1

1424

16

50

iutA, tratT, fyuA

IncFIB(K), IncFIA(HI1), Col440I,Col440II)

blaCTX-M-15,blaSHV-26,blaSHV-78, blaSHV-98, blaSHV-145, blaSHV-179, blaSHV-194, blaSHV-199, blaTEM-1B

  1. Bolded β-lactam resistance genes; extended spectrum β-lactam resistance genes