Table 1 Strains information for sequence analysis in this study
Group | Strains | Accession no | Host | Country | Province | ||
|---|---|---|---|---|---|---|---|
S | M | L | |||||
HTN Viruses | |||||||
 HTNV 1 | AH09 | AF285264 | AF285265 | – | Niviventer niviventer | China | Anhui |
NC167 | AB027523 | AB027115 | DQ989237 | Niviventer niviventer | China | Anhui | |
 HTNV 2 | B78 | AB027093 | AB027056 | – | Homo sapiens | China | Shandong |
H5 | AB127996 | AB127993 | – | Homo sapiens | China | Heilongjiang | |
Liu | AF288649 | AF288648 | – | Homo sapiens | China | Shandong | |
 HTNV 3 | Q7 | AB027095 | AB027058 | – | Apodemus agrarius | China | Guizhou |
Q20 | AB027096 | AB027059 | – | Apodemus agrarius | China | Guizhou | |
Q36 | AB027094 | AB027057 | – | Apodemus agrarius | China | Guizhou | |
 HTNV 4 | A16 | AB027099 | AB027063 | – | Apodemus agrarius | China | Shanxi |
XAHu09066 | JF421284 | – | – | Homo sapiens | China | Xi'an | |
CA09082007 | HQ834499 | – | – | Apodemus agrarius | China | Xi'an | |
CA10081206 | HQ834503 | – | – | Apodemus agrarius | China | Xi'an | |
CGAa31P9 | – | EF990924 | – | Apodemus agrarius | China | Guizhou | |
CGHu2 | – | EU363819 | – | Homo sapiens | China | Guizhou | |
CGHu3612 | – | EF990923 | – | Homo sapiens | China | Guizhou | |
CGHu3614 | – | EF990922 | – | Homo sapiens | China | Guizhou | |
CGRni1 | – | EU363815 | – | Rattus nitidus | China | Guizhou | |
Q10 | – | AB027062 | – | Apodemus agrarius | China | Guizhou | |
Q32 | Â | Â | DQ371906 | Apodemus agrarius | China | Guizhou | |
|  | Q37 | – | AB027064 | – | Apodemus agrarius | China | Guizhou |
 HTNV 5 | 84FLi | AF366568 | AF366569 | AF336826 | Homo sapiens | China | Shanxi |
Chen4 | AB027101 | – | – | Homo sapiens | China | Anhui | |
 HTNV 6 | Bao14 | AB127998 | AB127995 | – | Apodemus agrarius | China | Heilongjiang |
HTN261 | AF252259 | – | – | – | China | Heilongjiang | |
Q33 | Â | AB027065 | Â | Apodemus agrarius | China | Guizhou | |
 HTNV 7 | 76-118/PRO | KT885049 | KT885048 | KT885047 | Apodemus agrarius | South Korea | – |
|  | CUMC-B11 | U37768 | U38177 | – | – | South Korea | – |
|  | S85-46 | AF288659 | AF288658 | – | Crocidura russula | China | Sichuan |
|  | LR1 | AF288294 | AF288293 | AF288292 | Apodemus agrarius | China | – |
|  | Aa04-722 | – | – | KU207174 | Apodemus agrarius | South Korea | – |
|  | Aa19-57 | – | – | MW796149 | Apodemus agrarius | South Korea | – |
|  | Aa16-176 | – | – | MH598473 | Apodemus agrarius | South Korea | – |
 HTNV 8 | Z10 | NC_006433 | NC_006437 | NC_006435 | Homo sapiens | China | Zhejiang |
 HTNV 9 | A9 | AF329390 | U00150 | AF293665 | Apodemus agrarius | China | Jiangsu |
Hu | AB027111 | AB027077 | – | Homo sapiens | China | Hubei | |
Other HTN virus strains of undetermined subtype | |||||||
| Â | TJJ16 | AY839871 | Â | Â | Rattus confucianus | China | Tianjin |
| Â | CGAa75 | EU092220 | Â | Â | Apodemus agrarius | China | Guizhou |
| Â | CGRn53 | EF990907 | Â | Â | Rattus norvegicus | China | Guizhou |
| Â | CGRn93MP8 | EF990905 | Â | Â | Rattus norvegicus | China | Guizhou |
| Â | YU61 | AY748308 | Â | Â | Â | China | Â |
| Â | YU62 | AY748309 | Â | Â | Â | China | Â |
| Â | KY | GU140098 | Â | Â | White rat | China | Yunnan |
| Â | Z37 | AF187082 | Â | Â | Â | China | Zhejiang |
Reference strains | |||||||
 ANDV | AH-1 | AF324902 | AF324901 | AF324900 | – | Argentina | – |
 PUUV | P360 | L11347 | L08755 | – | Clethrionomys glareolus | Russia | – |
 SEOV | L99 | AF288299 | AF288298 | AF288297 | Rattus losea | China | Jiangxi |
ZT10 | AY766368 | Â | Â | Â | China | Zhejiang | |
 DOBV | Dobrava-Belgrade | JQ026204 | JQ026205 | JQ026206 | Apodemus flavicollis | Germany | – |
 SNV | NMR-11 | L37904 | L37903 | L37902 | Peromyscus maniculatus | The United States | – |