Fig. 1

Output images obtained by uploading mutation.fastas to the mutation resistance analyzer (MRA) platform for UL54 and UL97. Reference.fastas for UL54 and UL97 were replaced with SNVs and indels extracted by Lofreq, respectively (UL54 mutation.fasta and UL97 mutation.fasta). The green line indicates that the range of input data is aligned. Each fasta covers the full length of each gene. Any detected mutation is indicated by a colored letter suggesting each phenotype. The pie chart shows the percentage of references reporting each phenotype