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Table 4 Genotypic resistance of 43 phenotypic MDR strains to second-line anti-TB drugs

From: Prediction of drug resistance profile of multidrug-resistant Mycobacterium tuberculosis (MDR-MTB) isolates from newly diagnosed case by whole genome sequencing (WGS): a study from a high tuberculosis burden country

Drug

Resistance phenotype (No. of strains)

Resistance genotype

MIC (µg/mL)

Total

Gene

Mutations

No. of strains

LFX

Resistant (7)

gyrA

A90V

2

4

5/7

   

D94A

1

16

 
   

D94G

1

16

 
   

D94H

1

8

 
 

Susceptible (36)

gyrA

D94G

1

0.5

1/36

MFX

Resistant (8)

gyrA

A90V

2

1

6/8

   

D94A

1

1

 
   

D94G

1

4

 
   

D94H

1

4

 
  

gyrb

S447F

1

1

1/8

 

Susceptible (35)

gyrA

D94G

1

0.12

1/35

Ak

Resistant (1)

rrs

A1401G

1

16

1/1

 

Susceptible (42)

rrs

C517T

1

0.25

1/42

Km

Resistant (1)

rrs

A1401G

1

40

1/1

 

Susceptible (42)

rrs

C517T

1

1.2

1/42

Eto

Resistant (3)

fabG1-inhA

C8T

1

10

3/3

   

C15C

2

20

 
 

Susceptible (40)

fabG1-inhA

C15C

1

5

1/40

Pas

Resistant (3)

folC

143 T

1

16

1/3

 

Susceptible (40)

folC

S150G

1

1

1/40