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Table 1 SmartAmp primer sequences

From: SEB genotyping: SmartAmp-Eprimer binary code genotyping for complex, highly variable targets applied to HBV

Target position

Primer name

Sequence (5' → 3′)

Length (bases)

87

TP

AGAGTCTAGACTCGTGGTGACTGCGAATTTTGG

33

FP

AGGACGCTGAGATGCGTCCTACAGGCGGGGTTTTTCTTGTTGAC

44

BP

TCAATTTTCTAGGGG

15

OP

CAGGACAAGTTGGAGGAC

18

oBP

AATCCTCACAAZACCG

16

170

TP

GATGTGTCTGCGGCGTTCCAGAAGAACCAA

30

FP

AGGACGCTGAGATGCGTCCTGACTTCTCTCAATTTTCTAGG

41

BP

ATCCTGCTGCTATGCCTCATCT

22

OP

ACGGGCAACATACCTTG

17

oBP

GCAGZCCCCAAC

12

203

TP

TTGTCCTGGCTATCGCATAGCAGCAGGATGAAGAGGA

37

FP

GCATTCGCCCTCCAATCACTCACCAACC

28

BP

TCTGCGGCGTTTTATC

16

OP

TAGTCCAGAAGAACCAAC

18

oBP

CCTGTCCZCCAAC

13

390–392

TP

CTTGAGCAGGAGTCGTGCAGGTGTCCTCTAATTCCAGG

38

FP

GCGACTCGCTCCGAAGGTTTTGTACAGC

28

BP

GTCCCGTGCTGGT

13

OP

CTGCTGCTATGCCTCATC

18

oBP-D

GGGATACAZAGAGGTT

16

oBP

GGGAAACAZAGAGGTT

16