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Table 2 Pathogens recovered by mNGS in drainage fluid

From: Detection of aerobe–anaerobe mixed infection by metagenomic next-generation sequencing in an adult suffering from descending necrotizing mediastinitis

Genus

Reads no.

Genus relative abundance

Species

Reads no.

Species relative abundance (%)

Prevotella

202,442

48.59%

Prevotella oris

78,656

18.32

   

Prevotella denticola

27,149

8.53

Streptococcus

53,838

20.19%

Streptococcus anginosus

28,322

18.29

Peptostreptococcus

22,052

8.22%

Peptostreptococcus stomatis

21,470

8.09

Fusobacterium

11,837

4.53%

Fusobacterium nucleatum

6789

3.67

Alloprevotella

11,472

3.63%

Alloprevotella tannerae

11,347

3.58