Pathogen species | Extension Primer Sequence | Molecular mass of extension primer | Extended base | Extension Product Sequence | Elongation Product Molecular Mass |
---|---|---|---|---|---|
M.catarrhalis | TCAACGCCCACATTT | 4471.9 | G | TCAACGCCCACATTTG | 4759.1 |
HRV | CTTTGAGTCCTCCGGC | 4824.1 | C | CTTTGAGTCCTCCGGCC | 5071.3 |
MP | AAAGCCACCCTGATCAC | 5108.4 | C | AAAGCCACCCTGATCACC | 5355.5 |
HCoV | ACGGCTGTGTAAAGA | 5234.4 | T | ACGGCTGTGTAAAGAT | 5561.5 |
Flu-A | CACGCTGCAGTCCTCGCT | 5411.5 | C | CACGCTGCAGTCCTCGCTC | 5658.7 |
CP | TTCCTCAACCGAAAGGTC | 5443.6 | C | TTCCTCAACCGAAAGGTCC | 5690.7 |
Flu-B | AAAGGCCATAGGGAATTG | 5596.7 | C | AAAGGCCATAGGGAATTGC | 5843.9 |
HMPV | ACGCGGCAGTTTTCAGACA | 5812.8 | A | ACGCGGCAGTTTTCAGACAA | 6084 |
B. pertussis | CTTCCCGCCCAGACCAAT | 5966.9 | G | CTTCCCGCCCAGACCAATG | 6254.1 |
H. influenzae | GATGCACTTCCACATTATAT | 6051 | T | GATGCACTTCCACATTATT | 6378.1 |
H5 | GATAAACAGTGGCGAGTTCC | 6166 | C | GATAAACAGTGGCGAGTTCCC | 6413.2 |
S.pyogenes | CCCCCTCCAGGAGCAACTTGA | 6336.1 | G | CCCCCTCCAGGAGCAACTTGAG | 6623.3 |
S.pneumoniae | GTATCAGATGAAGCAGGTTTG | 6525.3 | C | GTATCAGATGAAGCAGGTTTGC | 6772.4 |
PIV4 | GGTAGTAATGCCCCTTGCTTAA | 6725.4 | T | GGTAGTAATGCCCCTTGCTTAAT | 7052.5 |
H1N1 | CTGTACAGTCAGTGGTTTCCGT | 6732.4 | G | CTGTACAGTCAGTGGTTTCCGTG | 7019.6 |
S.agalactiae | CCAGGCCCCCCACGATACTCATG | 6914.5 | C | CCAGGCCCCCCACGATACTCATGC | 7161.7 |
PIV3 | GATCTCTGAGGATACAGATGAAT | 7111.7 | G | GATCTCTGAGGATACAGATGAATG | 7398.9 |
PIV2 | CCCTGTTATTTCTACTCTATCTAT | 7194.7 | G | CCCTGTTATTTCTACTCTATCTATG | 7481.9 |
ADV | CCCCCAAGTACGTGTCGGTGGCAC | 7314.7 | G | CCCCCAAGTACGTGTCGGTGGCACG | 7602 |
RSV | CTATTCTCTTCCTAATCTAGACATA | 7525.9 | G | CTATTCTCTTCCTAATCTAGACATAG | 7813.1 |
H3 | CGCTAAATAATGAGATCAGATGCAC | 7683 | C | CGCTAAATAATGAGATCAGATGCACC | 7930.2 |
L.pneumophila | GTATTTTTAAAATTCTTCCCCAAATC | 7854.1 | C | GTATTTTTAAAATTCTTCCCCAAATCG | 8141.3 |
PIV1 | GGGACGAATACGCATATTGCATCA | 8003.2 | G | GGGACGAATACGCATATTGCATCAC | 8250.4 |
HEV | AAAGGAAACACGGACA | 4941.3 | G | AAAGGAAACACGGACAC | 5188.4 |
H7 | ATGGACAAACTGTACGA | 5227.4 | A | ATGGACAAACTGTACGAA | 5498.6 |
H3N2 seasonal | AATCTTCCTGTATGCTCA | 5424.5 | A | AATCTTCCTGTATGCTCAA | 5695.8 |
HBoV | CTCTATATTGAAGGATCTGCAT | 6724.4 | C | CTCTATATTGAAGGATCTGCATG | 7011.6 |
GAPDH | ATACGACCAAATCTAAGAGAC | 6416.3 | G | ATACGACCAAATCTAAGAGACG | 6769.6 |