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Table 1 Genes, primer sequences, annealing temperatures and predicted size of PCR products

From: Antibiotic susceptibility of human-associated Staphylococcus aureus and its relation to agr typing, virulence genes, and biofilm formation

Gene

Protein

Primer sequence (5′-3′)

Product size (bp)

1Annea.(°C)

2Ref.

crtN

Staphyloxanthin

ATTGATCCAAAACGAGGCCC/ CGGCCCGTTTGAATTTAGGA

196

55

This study

Surface factors

cap5H

CP5 synthesis enzyme

ATGAGGATAGCGATTGAAAA/ CGCTTCTTAATCACTTTTGC

518

50

[3]

cap8H

CP8 synthesis enzyme

ATCGAAGAACATATCCAAGG/ TTCATCACCAATACCTTTTA

834

49

[3]

Hemolysins

hla

Alfa toxin

TGCCGCAGATTCTGATATTAA/ TTTCTGAAGAACGATCTGTCCA

845

55

[3]

hlb

Beta toxin

GCGGTTGTGGATTCGATAAT/ GGCTTTGATTGGGTAATGATC

524

55

[3]

hld

Delta toxin

GGGATGGCTTAATAACTCATACTT/ CAGAGATGTGATGGAAAATAGTTGA

236

62

[3]

Superantigenic toxins

tst

Toxic shock syndrome toxin-1

ACCCCTGTTCCCTTATCATC/ TTTTCAGTATTTGTAACGCC

326

52

[19]

eta

Exfoliative toxin A

CTAGTGCATTTGTTATTCAA/ TGCATTGACACCATAGTACT

119

50

[20]

etb

Exfoliative toxin B

ACAAGCAAAAGAATACAGCG/ GTTTTTGGCTGCTTCTCTTG

226

52

[19]

sea

Enterotoxin A

GGTTATCAATGTGCGGGTGG/ CGGCACTTTTTTCTCTTCGG

102

56

[19]

seb

Enterotoxin B

GTATGGTGGTGTAACTGAGC/ CCAAATAGTGACGAGTTAGG

164

55

[19]

sec

Enterotoxin C

AGATGAAGTAGTTGATGTGTATGG/ CACACTTTTAGAATCAACCG

451

52

[19]

sed

Enterotoxin D

CCAATAATAGGAGAAAATAAAAG/ ATTGGTATTTTTTTTCGTTC

278

48

[19]

see

Enterotoxin E

AGGTTTTTTCACAGGTCATCC/ CTTTTTTTTCTTCGGTCAATC

209

52

[19]

  1. 1: Annealing temperature, 2: reference