Table 4 Distribution of clonal lineages of S. aureus isolates among Umtata and Cape Town participants
spa-CC | Umtata | Cape Town | ||||
|---|---|---|---|---|---|---|
No. of isolates (%) | No. of spa types (%) | spa types (no. of isolates) | No. of isolates (%) | No. of spa types (%) | spa types (no. of isolates) | |
spa-CC002 | 9 | 3 (14) | t002 (4); t045 (2); t071 (3) | 10 | 4 (19) | t002 (5); t1215 (2); t18748 (1); t442 (2) |
spa-CC084 | 3 | 2 (10) | t084 (2); t491 (1); t19774 (1) | 5 | 2 (10) | t084 (3); t346 (2) |
spa cluster 3 | 3 | 2 (10) | t062 (2); t1399 (1) | 3 | 2 (10) | t062 (1); t2049 (2) |
spa cluster 4 | 9 | 2 (10) | t159 (1); t272 (8) | 2 | 1 (5) | t272 (2) |
spa cluster 5 | 12 | 2 (10) | t1476 (10); t1257 (2) | 10 | 2 (10) | t1476 (9); t18750 (1) |
spa cluster 6 | 3 | 1 (5) | t174 (3) | 13 | 2 (10) | t174 (12); t5471 (1) |
Singletons | 10 | 7 (33) | t015 (2); t148 (1); t2763 (1); t317 (3); t355 (1); t786 (1); t843 (1) | 13 | 7 (33) | t015 (2); t18354 (1); t1597 (1); t2078 (4); t335 (2); t881 (1); t891 (2) |
Unaligned/spa types with unknown repeat succession | 2 | 2 (10) | txAC (1) | 1 | 1 (5) | t15783 (1) |
Total | 51 | 21 | Â | 57 | 21 | Â |