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Table 2 Proportion of positive 16S PCR regarding sample types analyzed

From: Impact of 16S rDNA sequencing on clinical treatment decisions: a single center retrospective study

Type of sample

16S PCR

Positive 16S PCR (%)

Cardiac valve

173

80 (46%)

Abscess

71

29 (41%)

Bone sample

80

14 (18%)

Soft tissue

67

11 (16%)

Synovial fluid

178

24 (13%)

CSF

119

13 (11%)

Pleural fluid

27

5 (19%)

Sonication fluid

18

10 (56%)

Aqueous humour

57

5 (9%)

Other

16

0

Total

806

191 (24%)

  1. Abbreviations: PCR polymerase chain reaction, CSF cerebrospinal fluid