Table 2 Primer used for identification of classes A, B and C
ORF | Forward sequence | Reverse sequence | Product size (bp) | Reference |
|---|---|---|---|---|
Orf7ab | ACTACACTTTAAAACATTTAATCC AAAATCA | CCATAAGCCTCACTAGAAGGTATGAGTATA | 580 | [6] |
Orf 6ab1 | CAAGGGCAATAGAAAGCTGTATCA | ACAAGCACTTCATTCTTAGTATTACAAAT | 631 | [6] |
Orf6ab2 | TCATCTTGCCAACTTATAATGTGGA | TCTAGCGATATTAAACCAACAGCCT | 517 | [6] |
Orf5bII | CTGTGATGATGGGAGTGAAGAGC | GGTAATCGTTTCGGCGGTATT | 539 | [6] |
Orf6c | GTAGTAGATGATTGTGGTAATGATAAA | ATAGAATTGCTATTTACATGCTGG | 554 | [6] |
Orf7c | TTGAAGATAGATATTTTGTGGGTAAA | CTTTAAGTAGTGTTTTATGTCACTTGG | 746 | [6] |