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Table 3 Peptides not predicted

From: Computational MHC-I epitope predictor identifies 95% of experimentally mapped HIV-1 clade A and D epitopes in a Ugandan cohort

Participant’s Identification Participant’s HLA Alleles Experimental Peptide Sequence
E92 A*02:01 FKGPRKIIKCFNCGKEGHI
A*30:02  
B*44:03  
B*14:02  
Cw*04:01  
Cw*08:02  
E95 A*23:01 LVQNANPDCKSILRAL (both time points)
A*74:01 SKQKTQQAAADTGNSSKV
B*44:03  
B*15:10  
Cw*04:01  
Cw*16:01  
L913 A*02:01 IYSLIEESQNQQEKNEQEL
A*34:02  
B*45:01  
B*47:01  
Cw*06:02  
Cw*16:01  
  1. Experimentally mapped peptides that were not predicted by NetMHCpan4.0 as binders. Participant’s identifiers beginning with E or L represent early or late time sampling points respectively