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Table 1 Participant characteristics, HIV-1 infecting clade, Fiebig stage and HLA class I haplotypes

From: Computational MHC-I epitope predictor identifies 95% of experimentally mapped HIV-1 clade A and D epitopes in a Ugandan cohort

Subject

Sex

Age range (years)

HIV-1 subtype

Class-I HLA

Early Time Point (Days)

Fiebig Staging

Late Time Point (Days)

91

M

31–40

A

A*0201,*0301;B*5301,*5802;Cw*0401,*0602

121

VI

841

92

F

21–30

D

A*0201,*3002;B*4403,*1402Cw*0401,*0802

52

VI

743

94

M

51–60

A

A*3402,*7401;B*4403,*5802;Cw*0401,*0602

28

V

358

95

M

21–30

A

A*2301,*7401;B*4403,*1510;Cw*0401,*1601

30

VI

570

913

F

11–20

D

A*0201,*3402;B*4501,*4701;Cw*0602,*1601

61

VI

211

914

F

21–30

D

A*0101,*0201;B*0702,*4415;Cw*0407,*0702

31

IV

181