Skip to main content

Table 1 Primers used for sequencing of hsp65, erm(41) and rrl of the M. abscessus

From: A real-time PCR assay for rapid identification of inducible and acquired clarithromycin resistance in Mycobacterium abscessus

Primer

Target Gene

Sequence

Annealing Temp (°C)

Reference

TB11

hsp65

5′-ACCAACGATGGTGTGTCCAT-3’

60

[11]

TB12

hsp65

5′-CTTGTCGAAGGCCATACCCT-3’

60

[11]

ermF

erm(41)

5′-GACCGGGGCCTTCTTCGTGAT-3’

60

[12]

ermR1

erm(41)

5′-GACTTCCCCGCACCGATTCC-3’

60

[12]

erm41–2

erm(41)

5′-GGATTCCGGCGTCAAGAGACTC-3’

60

[9]

erm41–3

erm(41)

5′-CGAGCCCGCCCTACCAAGTCAC-3’

60

[7]

erm41–4

erm(41)

5′-CCGGCCCGTAGCGTCCAATG-3’

60

[13]

erm41–5

erm(41)

5′-ACTCCCCTGAGCGA ACAC-3’

60

[7]

19F

rrl

5′-GTAGCGAAATTCCTTGTCGG-3’

55

[14]

21R

rrl

5′-TTCCCGCTTAGATGCTTTCAG-3’

55

[14]

SP1

rrl

5′-CCTGCACGAATGGCGTAACG-3’

55

[15]

SP2mod

rrl

5′-CACCAGAGGTTCGTCCGTC-3’

55

[15]