From: Evaluation of TaqMan Array card (TAC) for the detection of 28 respiratory pathogens
Pathogen | Target gene | Primer/probe sequence | Reference or Source |
---|---|---|---|
INF-A | M | F, AAGACCAATCCTGTCACCTCTGA | [2] (modified) |
R, AAGCGTCTACGCTGCAGTCC | |||
P, ACGCTCACCGTGCC | |||
INF-B | HA | F, AAATACGGTGGATTAAACAAAAGCAA | [25] (modified) |
R, CCAGCAATAGCTCCGAAGAAA | |||
P, TGGGCAATTTCCTATGGC | |||
PIV-1 | HN | F, TGATTTAAACCCGGTAATTTCTCAT | [26] |
R, CCTTGTTCCTGCAGCTATTACAGA | |||
P, ACGACAACAGGAAATC | |||
PIV-2 | HN | F, AGGACTATGAAAACCATTTACCTAAGTGA | [26] (modified) |
R, AAGCAAGTCTCAGTTCAGCTAGATCA | |||
P, TGTTCAGTCACTGCTATAC | |||
PIV-3 | HN | F, AAAAGTTGATGAAAGATCAGATTATGCAT | [26] (modified) |
R, CCGGGACACCCAGTTGTG | |||
P, AAAGGCAAAATAATATTTCTC | |||
HMPV-A | F | F, AGAGATGTAGGCACCACAACTGC | Beijing Genomics institution |
R, CTGATCCTAGAGCCGTGCAAA | |||
P, TTCATCATTGCAGCAAGA | |||
HMPV-B | F | F, ACAATGGCAACTTTGCTTAAAGAA | Beijing Genomics institution |
R, GATTATAGGTGTGTCTGGTGCTGAA | |||
P, ATATTCCACAAAATCAGAGGC | |||
HRV | 5′ UTR | F, TTCCAGCCTGCGTGGC | [1] (modified) |
R, GAAACACGGACACCCAAAGTAGTC | |||
P, CCCCTGAATGYGGC | |||
HEV | 5′ UTR | F, GGTGYGAAGAGYCTATTGAGC | Beijing Genomics institution |
R, ACGGACACCCAAAGTAGTCG | |||
R, TCCGGCCCCTGAAT | |||
HAdV | Hexon | F, CCCAGTGGTCTTACATGCACAT | [3] (modified) |
R, GCCACGGTGGGGTTTCTAA | |||
P, CCGGGTCTGGTGCAG | |||
RSV-A | N | F, AGATCAACTTCTGTCATCCAGCAA | [25] (modified) |
R, TTCTGCACATCATAATTAGGAGTATCAAT | |||
P, CGGAGCACAGGAGAT | |||
RSV-B | N | F, AAGATGCAAATCATAAATTCACAGGA | [27] |
R, TGATATCCAGCATCTTTAAGTATCTTTATAGTG | |||
P, CTGGACATAGCATATAAC | |||
M. pneumoniae | P1 | F, GCAGTTGCTGGCGCTAAGTT | Beijing Genomics institution |
R, AAGCGAGGTACGGTAGCGGTAT | |||
P, TGGTAGGGAACTCGTTTTA | |||
C. pneumoniae | MOMP | F, CGTGGAGCCTTATGGGAATG | Beijing Genomics institution |
R, CGTCTGTTGGCAAGGGGA | |||
P, CAGTCCAAACCTAAAGTT | |||
S. pneumoniae | lytA | F, ACGCAATCTAGCAGATGAAGCA | [1] (modified) |
R, TCGTGCGTTTTAATTCCAGCT | |||
P, AACGCTTGATACAGGGAG | |||
M. tuberculosis | orfB | F, GGCTGTGGGTAGCAGACC | [28] (modified) |
R, CGGGTCCAGATGGCTTG | |||
P, ACCTGGGCAGGGTT | |||
HBOV | NP1 | F, AGAGGCTCGGGCTCATATCA | [29] (modified) |
R, CACTTGGTCTGAGGTCTTCGAA | |||
P, CAATCARCCACCTATCGTCT | |||
Measles virus | P | F, GCAATTGGATCAACTGAAGGC | Beijing Genomics institution |
R, AGAGTCAGCATCTTGGATTCCCT | |||
P, ACAGCGGTGAAGCG | |||
Rubella Virus | E1 | F, ACGCCGCACGGACAACT | Beijing Genomics institution |
R, TGTTGGTTGCCGGTGTAATTC | |||
P, AGGTCCCGCCCGAC | |||
Mumps virus | P | F, GCAATTGGATCAACTGAAGGC | Beijing Genomics institution |
R, AGAGTCAGCATCTTGGATTCCCT | |||
P, ACAGCGGTGAAGCG | |||
Coxiella burnetii | ICD | F, AATTTGGAGCAAAGCCCTTAGA | Beijing Genomics institution |
R, GTAAAAAGGCGTCGGCAATAAC | |||
P, ACCCTGGCATGTCT | |||
HCoV-229E | N | F, CAGTCAAATGGGCTGATGCA | [25] (modified) |
R, CAAAGGGCTATAAAGAGAATAAGGTATTCT | |||
P, AACGTGGTCGTCAGGG | |||
HCoV-NL63 | N | F, GCGTGTTCCTACCAGAGAGGAA | [25] (modified) |
R, GCTGTGGAAAACCTTTGGCA | |||
P, TGCTTTGGTCCTCGTGAT | |||
HCoV-OC43 | N | F, CGATGAGGCTATTCCGACTAGGT | [30] (modified) |
R, CCTTCCTGAGCCTTCAATATAGTAACC | |||
P, TGGCACGGTACTCC | |||
HCoV-HKU | N | F, AGGGATCCTACTAYTCAAGAAGCTATCC | [3] (modified) |
R, ATGAACGATTATTGGGTCCACG | |||
P, CGCCTGGTACGATTT | |||
Pan-Legionella | 5S–23S | F, GTACTAATTGGCTGATTGTCTTGACC | [1] (modified) |
R, CCTGGCGATGACCTACTTTCG | |||
P, ACTCTTTACCAAACCTG | |||
H. influenzae | bexA | F, GGACAAACATCACAAGCGGTTA | [1] (modified) |
R, TGCGGTAGTGTTAGAAAATGGTATTATG | |||
P, TTGTAGTATTGATACGCTTTGT | |||
B. pertussis target I | IS481a | F, CAAGGCCGAACGCTTCAT | [1] (modified) |
R, GAGTTCTGGTAGGTGTGAGCGTAA | |||
P, CCTTGCGTGAGTGGG | |||
B. pertussis target II | PtxA | F, GCCGCCAGCTCGTACTTC | [1] (modified) |
R, GGATACGGCCGGCATTG | |||
P, CGTCGACACTTATGGCGA | |||
IPCO | ABI | ||
RNP | RPP30 | F, AGATTTGGACCTGCGAGCG | WHO (modified) |
R, GAGCGGCTGTCTCCACAAGT | |||
P, CTGAAGGCTCTGCGC |