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Table 1 Primers used in this study for amplification of 16S rRNAmethyltransferase genes

From: Expansion of acquired 16S rRNA methytransferases along with CTX-M-15, NDM and OXA-48 within three sequence types of Escherichia coli from northeast India

Target primers

Sequence (Forward& reverse-5'-3')

Amplicon size (bp)

Reference

armA

GGTGCGAAAACAGTCGTAGT

1153

[22]

TCCTCAAATATCCTCTATGT

rmtA

CTAGCGTCCATCCTTTCCTC

635

[22]

TTTGCTTCCATGCCCTTGCC

rmtB

GGAATTCCATATGAACATCAACGATGCC

756

[22]

CCGCTCGAGTCCATTCTTTTTTATCAAGT

rmtC

CGAAGAAGTAACAGCCAAAG

1000

[22]

GCTAGAGTCAAGCCAGAAAA

rmtD

TCATTTTCGTTTCAGCAC

744

[22]

AAACATGAGCGAACTGAAGG

npmA

CGGGATCCAAGCACTTTCATACTGACG

981

[22]

CGGAATTCCAATTTTGTTCTTATTAGC

rmtE

ATGAATATTGATGAAATGGTTGC

818

[23]

TGATTGATTTCCTCCGTTTTTG

rmtF

GCGATACAGAAAACCGAAGG

589

[24]

ACCAGTCGGCATAGTGCTTT

rmtG

AAATACCGCGATGTGTGTCC

250

[25]

ACACGGCATCTGTTTCTTCC

rmtH

AATGACCATTGAACAGGCAGC

760

[26]

TCAAGCTGGGTTTGGCTGGA