SNPs / mutation haplotypes | Number of isolates (N = 54) n (%) | 95% CI | Number of isolates from East Africa (N = 14) n (%) | Number of isolates from West Africa (N = 40) n (%) | P-value |
---|---|---|---|---|---|
N86Y | 12 (22.2) | (0.111, 0.333) | 2 (14.3) | 10 (25.0) | 0.407 |
Y184F | 39 (72.2) | (0.603, 0.841) | 13 (92.9) | 26 (65.0) | 0.107 |
D1246Y | 3 (5.6) | (−0.005, 0.117) | 0 | 3 (7.5) | 0.292 |
NFD | 29 (53.7) | (0.404, 0.669) | 11 (78.6) | 18 (45.0) | 0.226 |
YFD | 8 (14.8) | (0.050, 0.238) | 2 (14.3) | 6 (15.0) | 0.948 |
YFY | 2 (3.7) | (−0.013, 0.087) | 0 | 2 (5.0) | 0.394 |
YYD | 2 (3.7) | (−0.013, 0.087) | 0 | 2 (5.0) | 0.394 |
NYY | 1 (1.9) | (0.001, 0.037) | 0 | 1 (2.5) | 0.55 |