Table 3 The amount of MHC-I, MHC-II, and B cell epitopes as well as N-glycosylation and O-glycosylation sites in rD6, rE6, rH6, rE4, rA4 and rH2, and glycosylation sites inside epitopes
Protein | Amino acid content | Amount of MHC-I epitopes in whole protein | Amount of MHC-II epitopes in whole protein | Amount of B cell epitopes in whole protein | Amount of N-glycosylation in whole protein/percent (%) | Amount of O-glycosylation in whole protein/percent (%) | Amount of N-glycosylation in MHC-I epitopes | Amount of O-glycosylation in MHC-I epitopes | Amount of N-glycosylation in MHC-II epitopes | Amount of O-glycosylation in MHC-II epitopes | Amount of N-glycosylation in B cell epitopes | Amount of O-glycosylation in B cell epitopes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
E6 | 727 | 13 | 196 | 10 | 3 (0.41) | 81 (7.70) | 1 | 7 | 3 | 36 | 0 | 18 |
D6 | 723 | 8 | 92 | 10 | 2 (0.28) | 69 (9.54) | 0 | 4 | 0 | 19 | 0 | 18 |
H6 | 1052 | 12 | 340 | 10 | 2 (0.19) | 53 (7.29) | 1 | 5 | 1 | 53 | 0 | 10 |
E4 | 364 | 10 | 70 | 8 | 0 (0.00) | 21 (5.77) | 0 | 7 | 0 | 5 | 0 | 9 |
A4 | 313 | 10 | 24 | 5 | 2 (0.64) | 6 (1.92) | 0 | 0 | 0 | 0 | 0 | 2 |
H2 | 236 | 9 | 50 | 4 | 0 (0.00) | 4 (1.69) | 0 | 0 | 0 | 3 | 0 | 0 |