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Table 3 Distribution of 24 clonal complexes and non-related isolates of S. pneumoniae circulating in the Arkhangelsk region in 2006 in conjunction to MLST sequence types, non-susceptibility to penicillin/macrolides, serotypes and relationship to global pandemic Pneumococcal Epidemiology Network (PMEN) clones. Sequence types with corresponded serotypes identical with three of the 43 PMEN clones are highlighted in a bold font

From: Epidemiological and molecular characterization of Streptococcus pneumoniae carriage strains in pre-school children in Arkhangelsk, northern European Russia, prior to the introduction of conjugate pneumococcal vaccines

CCa No(%)

STb

No

PNSP/MNSP

Serotype

Relationship to PMEN-strains

CC15 15(8.9)

25

1

Mc

14

SLVg CSR14–10, DLV England14–9.

423

9

 

19F

DLVh CSR14–10, DLV England14–9

2995

3

 

14

DLV CSR14–10, DLV England14–9

2997

2

 

14

TLVi CSR14–10, TLV England14–9,

TLV CSR19A-11

CC62 4(2.4)

62

4

 

11A/NT

SLV Netherlands8–33

CC66 3(1.8)

3104

1

 

9 N

DLV Tennessee14–18

3224

2

 

9 N

SLV Tennessee14–18

CC102 9(5.4)

102

7

 

18C

 

1016

1

 

18C

 

3187

1

 

18C

 

CC113 2(1.2)

1363

1

 

35C

DLV Netherlands18C-36

3107

1

 

6B

SLV Netherlands18C-36

CC123 3(1.8)

123

3

 

13

SLV Netherlands18C-36

CC124 13(8.3)

2994

13

 

23F

 

CC180 11(6.5)

180

2

 

3

Netherlands3–31

505

8

 

3

DLV Netherlands3–31

3202

1

 

3

TLV Netherlands3–31

CC193 2 (1.2)

2186

2

 

15A

TLVi Greece21–30

CC271 6(3.6)

2993

3

 

19F

SLV of Taiwan19F-14

2998

3

 

19F

SLV of Taiwan19F-14

CC315 7(3.6)

315

2

P and Md

6B

Poland6B-20

315

3

M

6B

Poland6B-20

3200

1

M

6B

SLV Poland6B-20

CC344 9(5.4)

344

7

P and M

NTf

NorwayNT-42

344

1

M

NT

NorwayNT-42

2996

1

Pe

NT

SLV of NorwayNT-42

CC393 3(1.8)

393

3

 

38

 

CC490 6(3.6)

490

1

 

6A

 

1141

3

 

6A

 

3244

2

 

6A/B

 

CC600 12(7.1)

600

10

 

6A

 

3203

2

 

6A

 

CC1012 5 (3.0)

1012

1

 

11A

 

2860

4

 

11A

 

CC1262 7(4.2)

1262

1

 

15C

 

2859

6

 

15B/C

 

CC1500 7(4.2)

1500

7

P

23F

 

CC2989 9(5.4)

2989

9

 

19F

DLV Colombia23F-26

CC2990 2(1.2)

2990

2

 

6B

 

CC2992 4(2.4)

2992

4

 

19F

 

CC3105 3(1.8)

3105

3

 

23A

TLV Tennessee 23F-4

CC3106 3(1.8)

3106

3

 

6B

 

CC3186 3(1.8)

3186

1

P

NT

 

3186

1

 

NT

 

3208

1

P

NT

 

Non-related isolates

     

17 (10.1)

     

386

1

P and M

6B

DLV Poland6B-20

1025

1

 

15C

 

1028

1

 

35F

 

1470

1

 

22F

 

1684

1

 

31

 

2966

1

 

16F

 

2991

1

M

35F

 

3185

1

 

35B

 

3188

1

 

23F

 

3195

1

 

NT

TLV Netherlands7F-39

3196

1

 

6B

 

3197

1

 

9 N

DLV Netherlands15B-37

3198

1

 

6B

 

3199

1

 

6A

TLV Greece21–30

3201

1

M

23A

 

3209

1

 

7C

 

3243

1

 

18F

 
  1. aClonal complex
  2. bSequence type
  3. cMacrolide non-susceptible pneumococci
  4. dPenicillin and macrolide non-susceptible pneumococci
  5. ePenicillin non-susceptible pneumococci
  6. fNon-serotypeable
  7. gSingle locus variant
  8. hDouble locus variant
  9. iDifferences in three loci
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BMC Infectious Diseases

ISSN: 1471-2334

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