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Table 1 Summary of next generation sequencing data from urine of infants with congenital CMV

From: Association of CMV genomic mutations with symptomatic infection and hearing loss in congenital CMV infection

No. of patient samples30
No of bases sequenced7.4 × 109
Average reads mapped to reference per sample2.1 × 106
Average maximum depth44,063
Average depth1468
Average genome coverage93%
Total variants172,171
Unique variants42,846
Single nucleotide variants (SNV)29,306
Multi-nucleotide variants (MNV)2517
Insertions1905
Deletions1204
Nucleotide replacements174
Urine Viral Load Median (range)16,424 (69–6.4 × 105)IU/mL